RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PPIAL4CA0A0B4J2A2 164 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 PPIAL4GP0DN37 164 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 ZNF182P17025 639 aaPredicted RBP17.57■□□□□ 0.4
CASC4-204ENST00000557945 SOX6P35712 828 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 PAX2Q02962 417 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 RBM39Q14498 530 aaKnown RBP17.57■□□□□ 0.4
CASC4-204ENST00000557945 KRBOX4Q5JUW0 171 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 FAM89BQ8N5H3 189 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 KCTD12Q96CX2 325 aaKnown RBP17.57■□□□□ 0.4
CASC4-204ENST00000557945 NDUFA13Q9P0J0 144 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 KCNS2Q9ULS6 477 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 SPATA2Q9UM82 520 aa17.57■□□□□ 0.4
CASC4-204ENST00000557945 KIR2DS1A0A191URI9 304 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 UBE2QL1A1L167 161 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 FUOMA2VDF0 154 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 CSN2P05814 226 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 CHATP28329 748 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 KCNJ3P48549 501 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 P2RX3P56373 397 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 C6orf201Q7Z4U5 140 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 DYNC2LI1Q8TCX1 351 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 AP3S1Q92572 193 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 COQ2Q96H96 371 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 GSX1Q9H4S2 264 aaPredicted RBP17.56■□□□□ 0.4
CASC4-204ENST00000557945 PLEKHJ1Q9NW61 149 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 RHBDL2Q9NX52 303 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 COMMD3Q9UBI1 195 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 INSIG2Q9Y5U4 225 aa17.56■□□□□ 0.4
CASC4-204ENST00000557945 MEX3AA1L020 520 aaKnown RBP17.55■□□□□ 0.4
CASC4-204ENST00000557945 LIPFP07098 398 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 GATA3P23771 443 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 GLIPR1P48060 266 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 TMEM200BQ69YZ2 307 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 SAMD12Q8N8I0 201 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 LY6G5BQ8NDX9 201 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 C8orf46Q8TAG6 207 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 PLPPR1Q8TBJ4 325 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 ACOT12Q8WYK0 555 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 DACT3Q96B18 629 aaPredicted RBP17.55■□□□□ 0.4
CASC4-204ENST00000557945 FAAP24Q9BTP7 215 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 ETAA1Q9NY74 926 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 ONECUT1Q9UBC0 465 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 WNK2Q9Y3S1 2297 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 TLN2Q9Y4G6 2542 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 ZANQ9Y493 2812 aa17.55■□□□□ 0.4
CASC4-204ENST00000557945 hADV38S2A0JD32 116 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 ZNF701M0R085 212 aaPredicted RBP17.54■□□□□ 0.4
CASC4-204ENST00000557945 GLAP06280 429 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 ERP29P30040 261 aaKnown RBP17.54■□□□□ 0.4
CASC4-204ENST00000557945 MEF2CQ06413 473 aaPredicted RBP17.54■□□□□ 0.4
CASC4-204ENST00000557945 MOGAT2Q3SYC2 334 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 Q6ZTK2 550 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 Q71RC1 249 aaPredicted RBP17.54■□□□□ 0.4
CASC4-204ENST00000557945 OR10R2Q8NGX6 335 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 PHF21AQ96BD5 680 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 SLC25A38Q96DW6 304 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 RAB3CQ96E17 227 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 ARHGAP5-AS1Q96IT6 56 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 CYYR1Q96J86 154 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 SULT4A1Q9BR01 284 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 C7orf69Q9H7B7 122 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 LPAR3Q9UBY5 353 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 KIF25Q9UIL4 384 aa17.54■□□□□ 0.4
CASC4-204ENST00000557945 MEIKINA0A087WXM9 373 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 ODAMA1E959 279 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 A8MV72 311 aaPredicted RBP17.53■□□□□ 0.4
CASC4-204ENST00000557945 ARF6P62330 175 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 RSBN1Q5VWQ0 802 aaPredicted RBP17.53■□□□□ 0.4
CASC4-204ENST00000557945 MZT2AQ6P582 158 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 TRAPPC6BQ86SZ2 158 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 RTN4RL2Q86UN3 420 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 DYRK2Q92630 601 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 DGCR14Q96DF8 476 aaKnown RBP17.53■□□□□ 0.4
CASC4-204ENST00000557945 CCDC59Q9P031 241 aaKnown RBP17.53■□□□□ 0.4
CASC4-204ENST00000557945 A0A075B6Q4 140 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 A0A1W2PPH5 198 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 TMEM30CPA0ZSE6 113 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 FOXI3A8MTJ6 420 aaPredicted RBP17.53■□□□□ 0.4
CASC4-204ENST00000557945 TMEM50BP56557 158 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 PAX8Q06710 450 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 DYNC1I2Q13409 638 aaKnown RBP17.53■□□□□ 0.4
CASC4-204ENST00000557945 ZNF273Q14593 569 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 PLAC9Q5JTB6 97 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 UBE2NLQ5JXB2 153 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 SLC35E4Q6ICL7 350 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 DCUN1D5Q9BTE7 237 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 PECRQ9BY49 303 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 HSF4Q9ULV5 492 aa17.53■□□□□ 0.4
CASC4-204ENST00000557945 TRGV10A0A0A0MS01 117 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 J3QLI3 93 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 RAB27BO00194 218 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 SCGNO76038 276 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 CCL3L1P16619 93 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 CR1LQ2VPA4 569 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 METTL11BQ5VVY1 283 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 ZNF497Q6ZNH5 498 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 CMTM4Q8IZR5 234 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 CCDC107Q8WV48 283 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 TMPRSS13Q9BYE2 586 aa17.52■□□□□ 0.39
CASC4-204ENST00000557945 AUP1Q9Y679 476 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms