RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 VMO1Q7Z5L0 202 aa21■□□□□ 0.95
SMAD6-202ENST00000557916 Q8N7P7 452 aa21■□□□□ 0.95
SMAD6-202ENST00000557916 CLEC2LP0C7M8 214 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 CCL3L1P16619 93 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 GLIPR1P48060 266 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 ALDH3B2P48448 385 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 BRICD5Q6PL45 260 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 COQ2Q96H96 371 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 POM121Q96HA1 1249 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 BARHL1Q9BZE3 327 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 RCC2Q9P258 522 aaKnown RBP20.99■□□□□ 0.95
SMAD6-202ENST00000557916 NAV3Q8IVL0 2385 aa20.99■□□□□ 0.95
SMAD6-202ENST00000557916 TRAV40A0A0B4J280 105 aa20.98■□□□□ 0.95
SMAD6-202ENST00000557916 HOXB4P17483 251 aaPredicted RBP20.98■□□□□ 0.95
SMAD6-202ENST00000557916 METTL8Q9H825 291 aaKnown RBP20.98■□□□□ 0.95
SMAD6-202ENST00000557916 SIRT7Q9NRC8 400 aa20.98■□□□□ 0.95
SMAD6-202ENST00000557916 NUP50Q9UKX7 468 aa20.98■□□□□ 0.95
SMAD6-202ENST00000557916 LINC00312Q9Y6C7 94 aa20.98■□□□□ 0.95
SMAD6-202ENST00000557916 IGHV3OR16-10A0A075B7F0 116 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 H3BUI4 141 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 ZNF728P0DKX0 622 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 IGHV4-38-2P0DP08 117 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 SLC2A2P11168 524 aaPredicted RBP20.97■□□□□ 0.95
SMAD6-202ENST00000557916 FUT3P21217 361 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 TGFBR1P36897 503 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 RAB12Q6IQ22 244 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 TCF23Q7RTU1 214 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 TRAPPC6BQ86SZ2 158 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 PLPPR1Q8TBJ4 325 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 NEK7Q8TDX7 302 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 URM1Q9BTM9 101 aaKnown RBP20.97■□□□□ 0.95
SMAD6-202ENST00000557916 TM2D1Q9BX74 207 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 LIN7BQ9HAP6 207 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 FBLN5Q9UBX5 448 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 PEX16Q9Y5Y5 336 aa20.97■□□□□ 0.95
SMAD6-202ENST00000557916 ODAMA1E959 279 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 MCRIP1C9JLW8 97 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 LDLRAD4O15165 306 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 GPR157Q5UAW9 335 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 SIGIRRQ6IA17 410 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 SFXN4Q6P4A7 337 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 GPR141Q7Z602 305 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 LHX4Q969G2 390 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 ZNF714Q96N38 554 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 NICN1Q9BSH3 213 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 LPAR5Q9H1C0 372 aa20.96■□□□□ 0.95
SMAD6-202ENST00000557916 TRGV10A0A0A0MS01 117 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 A0A0B4J203 849 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 CENPVL3A0A0U1RRI6 287 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 TMEM272A0A1B0GTI8 110 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 hCG_1809904A0A1W2PP81 198 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 A0A1W2PPE2 198 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 A0A1W2PR64 198 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 A0A1W2PRV1 198 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 PDCD6O75340 191 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 EPHA1P21709 976 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 PRTN3P24158 256 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 DLX6P56179 175 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 PAX5Q02548 391 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 SCGB2A2Q13296 93 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 RBM39Q14498 530 aaKnown RBP20.95■□□□□ 0.95
SMAD6-202ENST00000557916 RSBN1Q5VWQ0 802 aaPredicted RBP20.95■□□□□ 0.95
SMAD6-202ENST00000557916 C11orf42Q8N5U0 333 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 DAPK2Q9UIK4 370 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 KIF25Q9UIL4 384 aa20.95■□□□□ 0.95
SMAD6-202ENST00000557916 UBE2J1Q9Y385 318 aaPredicted RBP20.95■□□□□ 0.95
SMAD6-202ENST00000557916 MEIKINA0A087WXM9 373 aa20.95■□□□□ 0.94
SMAD6-202ENST00000557916 GLAP06280 429 aa20.95■□□□□ 0.94
SMAD6-202ENST00000557916 DLX1P56177 255 aa20.95■□□□□ 0.94
SMAD6-202ENST00000557916 ANKRD13BQ86YJ7 626 aa20.95■□□□□ 0.94
SMAD6-202ENST00000557916 CORO2AQ92828 525 aa20.95■□□□□ 0.94
SMAD6-202ENST00000557916 NEDD4LQ96PU5 975 aa20.95■□□□□ 0.94
SMAD6-202ENST00000557916 NCOR1P1Q9H4R4 102 aa20.95■□□□□ 0.94
SMAD6-202ENST00000557916 UNKLQ9H9P5 680 aaKnown RBP20.95■□□□□ 0.94
SMAD6-202ENST00000557916 RAB22AQ9UL26 194 aa20.95■□□□□ 0.94
SMAD6-202ENST00000557916 A0A0A6YYD4 124 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 C17orf98A8MV24 154 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 PRB3Q04118 309 aaPredicted RBP20.94■□□□□ 0.94
SMAD6-202ENST00000557916 PLA2G7Q13093 441 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 NKAPLQ5M9Q1 402 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 GPR107Q5VW38 600 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 SLC35E4Q6ICL7 350 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 PDZD9Q8IXQ8 264 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 TNFRSF14Q92956 283 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 OR6C3Q9NZP0 311 aa20.94■□□□□ 0.94
SMAD6-202ENST00000557916 CHATP28329 748 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 BLVRBP30043 206 aaPredicted RBP20.93■□□□□ 0.94
SMAD6-202ENST00000557916 RPL5P46777 297 aaKnown RBP20.93■□□□□ 0.94
SMAD6-202ENST00000557916 ERVFRD-1P60508 538 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 VBP1P61758 197 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 NCS1P62166 190 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 SLC16A12Q6ZSM3 486 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 FAM89BQ8N5H3 189 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 C22orf15Q8WYQ4 148 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 MS4A7Q9GZW8 240 aaPredicted RBP20.93■□□□□ 0.94
SMAD6-202ENST00000557916 NAA50Q9GZZ1 169 aaKnown RBP20.93■□□□□ 0.94
SMAD6-202ENST00000557916 ETAA1Q9NY74 926 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 ZNF69Q9UC07 566 aa20.93■□□□□ 0.94
SMAD6-202ENST00000557916 DSCAML1Q8TD84 2053 aa20.92■□□□□ 0.94
SMAD6-202ENST00000557916 TMEM30CPA0ZSE6 113 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms