RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 BATF2Q8N1L9 274 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 FAM89BQ8N5H3 189 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 OR4S1Q8NGB4 309 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 GFI1Q99684 422 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 DPCDQ9BVM2 203 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-234ENST00000557703 RAB22AQ9UL26 194 aa11.27□□□□□ -0.61
SHMT2-234ENST00000557703 LOC100506127A0A0U1RQW1 187 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 METTL21EPA6NDL7 271 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 C17orf98A8MV24 154 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 PDCD6O75340 191 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 AVPP01185 164 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 IL1AP01583 271 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 SMIM18P0DKX4 95 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 ERVFRD-1P60508 538 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 TAF9Q16594 264 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 KRBOX4Q5JUW0 171 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 OR52W1Q6IF63 320 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 TRAT1Q6PIZ9 186 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 FAM185AQ8N0U4 392 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 SUMF2Q8NBJ7 301 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 TMEM104Q8NE00 496 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 OR10A7Q8NGE5 316 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 ZNF714Q96N38 554 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 NEDD4LQ96PU5 975 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 BCL7BQ9BQE9 202 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 RIMS4Q9H426 269 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-234ENST00000557703 LINC00574Q9H8X3 128 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 C19orf12Q9NSK7 152 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 ONECUT1Q9UBC0 465 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 HSF4Q9ULV5 492 aa11.26□□□□□ -0.61
SHMT2-234ENST00000557703 ODAMA1E959 279 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 ZNF729A6NN14 1252 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-234ENST00000557703 LDLRAD4O15165 306 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 MPIG6BO95866 241 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 CALCBP10092 127 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 SDC2P34741 201 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 RPL5P46777 297 aaKnown RBP11.25□□□□□ -0.61
SHMT2-234ENST00000557703 ALDH3B2P48448 385 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 UBE2E1P51965 193 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 SNU13P55769 128 aaKnown RBP11.25□□□□□ -0.61
SHMT2-234ENST00000557703 TUSC1Q2TAM9 212 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 C2orf76Q3KRA6 126 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 KIAA2026Q5HYC2 2103 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 ATAD3CQ5T2N8 411 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 ANKRD13BQ86YJ7 626 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 GAPTQ8N292 157 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 OR56B1Q8NGI3 324 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 JMJD8Q96S16 334 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 TBX15Q96SF7 602 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 PCGF1Q9BSM1 259 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 FUNDC2Q9BWH2 189 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 SUCNR1Q9BXA5 334 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 CHST6Q9GZX3 395 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 PPA2Q9H2U2 334 aa11.25□□□□□ -0.61
SHMT2-234ENST00000557703 SHISA3A0PJX4 238 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 TMEM30CPA0ZSE6 113 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 TFF1P04155 84 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 TFAP2AP05549 437 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 EPHA1P21709 976 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 AESQ08117 197 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 DYNC1I2Q13409 638 aaKnown RBP11.24□□□□□ -0.61
SHMT2-234ENST00000557703 UNC119Q13432 240 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 EDDM3AQ14507 147 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 RSBN1Q5VWQ0 802 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-234ENST00000557703 RAB12Q6IQ22 244 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 SFXN4Q6P4A7 337 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 HEPN1Q6WQI6 88 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 SLC16A12Q6ZSM3 486 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 VMO1Q7Z5L0 202 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 GPR141Q7Z602 305 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 FGFRL1Q8N441 504 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 Q8N7P7 452 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 OR4M1Q8NGD0 313 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 OR51D1Q8NGF3 324 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 OR13D1Q8NGV5 346 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-234ENST00000557703 CENPOQ9BU64 300 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 MS4A7Q9GZW8 240 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-234ENST00000557703 BANF2Q9H503 90 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 LIN7BQ9HAP6 207 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 SCOCQ9UIL1 159 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 MGAT4AQ9UM21 535 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 PEX16Q9Y5Y5 336 aa11.24□□□□□ -0.61
SHMT2-234ENST00000557703 CENPVL3A0A0U1RRI6 287 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 A0A1W2PP11 408 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 ORC5O43913 435 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 HOXB4P17483 251 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-234ENST00000557703 DLX6P56179 175 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 P2RY14Q15391 338 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 MIDNQ504T8 468 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 KLF17Q5JT82 389 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-234ENST00000557703 ZNF497Q6ZNH5 498 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 RTN4RL2Q86UN3 420 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 BPIFB2Q8N4F0 458 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 C11orf42Q8N5U0 333 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 TNFRSF14Q92956 283 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 KCTD12Q96CX2 325 aaKnown RBP11.23□□□□□ -0.61
SHMT2-234ENST00000557703 COQ2Q96H96 371 aa11.23□□□□□ -0.61
SHMT2-234ENST00000557703 NKX3-1Q99801 234 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms