RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 POLR3KQ9Y2Y1 108 aaPredicted RBP12.62□□□□□ -0.39
NEDD1-213ENST00000557644 A6NHS1 94 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 GPR37O15354 613 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 TMEM127O75204 238 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 CSN2P05814 226 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 SOX6P35712 828 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 SCAND1P57086 179 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 RPL31P62899 125 aaKnown RBP12.62□□□□□ -0.39
NEDD1-213ENST00000557644 OLFML2AQ68BL7 652 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 OR56B1Q8NGI3 324 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 PPP1R35Q8TAP8 253 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 RAB40AQ8WXH6 277 aa12.62□□□□□ -0.39
NEDD1-213ENST00000557644 ZMAT3Q9HA38 289 aaKnown RBP12.62□□□□□ -0.39
NEDD1-213ENST00000557644 SONP18583 2426 aaKnown RBP12.61□□□□□ -0.39
NEDD1-213ENST00000557644 IGHV2-70DA0A0C4DH43 119 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 MCRIP1C9JLW8 97 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 KRBOX4Q5JUW0 171 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 CD276Q5ZPR3 534 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 CMTM4Q8IZR5 234 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 DTX3Q8N9I9 347 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 NUDT16L1Q9BRJ7 211 aaKnown RBP12.61□□□□□ -0.39
NEDD1-213ENST00000557644 SLIRPQ9GZT3 109 aaKnown RBP12.61□□□□□ -0.39
NEDD1-213ENST00000557644 GSX1Q9H4S2 264 aaPredicted RBP12.61□□□□□ -0.39
NEDD1-213ENST00000557644 PLEKHJ1Q9NW61 149 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 CCDC59Q9P031 241 aaKnown RBP12.61□□□□□ -0.39
NEDD1-213ENST00000557644 A0A075B6Q4 140 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 PPIAL4CA0A0B4J2A2 164 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 METTL21EPA6NDL7 271 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 LY6G6DO95868 133 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 PPIAL4GP0DN37 164 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 P2RX3P56373 397 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 ZNF273Q14593 569 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 RSBN1Q5VWQ0 802 aaPredicted RBP12.61□□□□□ -0.39
NEDD1-213ENST00000557644 TMEM200BQ69YZ2 307 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 TCF23Q7RTU1 214 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 FAM185AQ8N0U4 392 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 OR10R2Q8NGX6 335 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 AP3S1Q92572 193 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 POM121Q96HA1 1249 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 KCNK7Q9Y2U2 307 aa12.61□□□□□ -0.39
NEDD1-213ENST00000557644 TRAV39A0A0B4J263 110 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 A0A1W2PQ09 198 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 HPGDSO60760 199 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 ECDO95905 644 aaPredicted RBP12.6□□□□□ -0.39
NEDD1-213ENST00000557644 FOSL1P15407 271 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 GNB3P16520 340 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 Q6ZTK2 550 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 RAB3CQ96E17 227 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 ETAA1Q9NY74 926 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 KIF25Q9UIL4 384 aa12.6□□□□□ -0.39
NEDD1-213ENST00000557644 TRAV20A0A0B4J274 112 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 KIR2DS1A0A191URI9 304 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 ENSAO43768 121 aaKnown RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 CD5LO43866 347 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 EIF4EP06730 217 aaKnown RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 MTORP42345 2549 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 UBE2NLQ5JXB2 153 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 DCAF12L2Q5VW00 463 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 FAHD2BQ6P2I3 314 aaPredicted RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 Q71RC1 249 aaPredicted RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 GLCCI1Q86VQ1 547 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 ACOT12Q8WYK0 555 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 FAHD2AQ96GK7 314 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 TEP1Q99973 2627 aaKnown RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 PECRQ9BY49 303 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 ELF5Q9UKW6 265 aaPredicted RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 INSIG2Q9Y5U4 225 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 KIAA2026Q5HYC2 2103 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 TRBV23-1A0A0A0MS06 115 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 ODAMA1E959 279 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 CTDSP2O14595 271 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 CCL3L1P16619 93 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 ERP29P30040 261 aaKnown RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 DVL1P1P54792 670 aaPredicted RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 ERVFRD-1P60508 538 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 ARF6P62330 175 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 RBM39Q14498 530 aaKnown RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 IZUMO1Q8IYV9 350 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 HDHD3Q9BSH5 251 aaPredicted RBP12.59□□□□□ -0.39
NEDD1-213ENST00000557644 ABCG5Q9H222 651 aa12.59□□□□□ -0.39
NEDD1-213ENST00000557644 MEIKINA0A087WXM9 373 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 CDK2P24941 298 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 KCNJ3P48549 501 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 DLX1P56177 255 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 MADCAM1Q13477 382 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 ZNF497Q6ZNH5 498 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 CCDC107Q8WV48 283 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 ONECUT1Q9UBC0 465 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 AK3Q9UIJ7 227 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 HSF4Q9ULV5 492 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 A0A0G2JMP0 313 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 A0A0X1KG70 313 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 ELK1P19419 428 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 FAM189A2Q15884 450 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 C11orf91Q3C1V1 193 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 MZT2AQ6P582 158 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 BTNL3Q6UXE8 466 aa12.58□□□□□ -0.4
NEDD1-213ENST00000557644 CLEC9AQ6UXN8 241 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms