RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 TMEM163Q8TC26 289 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 RPEQ96AT9 228 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 DUX3Q96PT4 197 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 PRR25Q96S07 402 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 PCDHB16Q9NRJ7 776 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 LINC00527Q9UJ94 153 aa9.99□□□□□ -0.81
SHMT2-223ENST00000556689 A0A087X0M5 115 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 A0A1B0GX30 115 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 SIRPB1O00241 398 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 MYF6P23409 242 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 ECI1P42126 302 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 PTGFRP43088 359 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 MTCP1P56278 107 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 HES1Q14469 280 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 CASC10Q5T4H9 136 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 C9orf66Q5T8R8 295 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 TCEANCQ8N8B7 351 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 C5orf56Q8N8D9 126 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 YIPF7Q8N8F6 280 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 DNAAF1Q8NEP3 725 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 OR5M8Q8NGP6 311 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 MUC7Q8TAX7 377 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 C10orf35Q96D05 121 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 RAX2Q96IS3 184 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 MYCBPQ99417 103 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-223ENST00000556689 CHST5Q9GZS9 411 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 HMG20AQ9NP66 347 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 EXOSC4Q9NPD3 245 aaKnown RBP9.98□□□□□ -0.81
SHMT2-223ENST00000556689 SCN3BQ9NY72 215 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 GSTK1Q9Y2Q3 226 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 RYR2Q92736 4967 aa9.98□□□□□ -0.81
SHMT2-223ENST00000556689 DSCAML1Q8TD84 2053 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 ODAMA1E959 279 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 FGF16O43320 207 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 DENRO43583 198 aaKnown RBP9.97□□□□□ -0.81
SHMT2-223ENST00000556689 PRKYO43930 277 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 OR2H2O95918 312 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 IGHG2P01859 326 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 KRT8P05787 483 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 TMEM11P17152 192 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 NFYBP25208 207 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 ATP6V1E1P36543 226 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 POLR2IP36954 125 aaKnown RBP9.97□□□□□ -0.81
SHMT2-223ENST00000556689 POU3F4P49335 361 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 LUMP51884 338 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-223ENST00000556689 SNRPGP62308 76 aaKnown RBP9.97□□□□□ -0.81
SHMT2-223ENST00000556689 SCN1BQ07699 218 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 HNF4GQ14541 408 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 KRBOX4Q5JUW0 171 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 NXNL2Q5VZ03 156 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 TEX38Q6PEX7 206 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 BCDIN3DQ7Z5W3 292 aaKnown RBP9.97□□□□□ -0.81
SHMT2-223ENST00000556689 SLC35E3Q7Z769 313 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 CATSPERDQ86XM0 798 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 FOXRED2Q8IWF2 684 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 OR56B4Q8NH76 319 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 PP6455Q8WZ26 134 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 TOMM40LQ969M1 308 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 IL4I1Q96RQ9 567 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 ADGRL4Q9HBW9 690 aa9.97□□□□□ -0.81
SHMT2-223ENST00000556689 AMMECR1Q9Y4X0 333 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-223ENST00000556689 SACSQ9NZJ4 4579 aa9.96□□□□□ -0.81
SHMT2-223ENST00000556689 KBTBD11-OT1A0A1B0GTJ5 212 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 ZNF729A6NN14 1252 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-223ENST00000556689 GNAO1P09471 354 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 PRKACBP22694 351 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 CHATP28329 748 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 EPHA2P29317 976 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 PDZK1IP1Q13113 114 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 TMED1Q13445 227 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 KIR2DS1Q14954 304 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 PNLIPRP3Q17RR3 467 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 C17orf58Q2M2W7 97 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 LCNL1Q6ZST4 164 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 STPG2Q8N412 459 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 DRAM1Q8N682 238 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 Q8NFD4 153 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 MRPL48Q96GC5 212 aaKnown RBP9.96□□□□□ -0.82
SHMT2-223ENST00000556689 ING3Q9NXR8 418 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 OR6C3Q9NZP0 311 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 SCOCQ9UIL1 159 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 TPRKBQ9Y3C4 175 aa9.96□□□□□ -0.82
SHMT2-223ENST00000556689 RPL36Q9Y3U8 105 aaKnown RBP9.96□□□□□ -0.82
SHMT2-223ENST00000556689 IGKV1-9A0A0C4DH69 117 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 METTL15A6NJ78 407 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 LINC01548A6NM66 108 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 SEC14L6B5MCN3 397 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 J3QR06 171 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 TNFAIP8O95379 198 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
SHMT2-223ENST00000556689 CSN2P05814 226 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 ZNF44P15621 663 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 ATF1P18846 271 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 CDX1P47902 265 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-223ENST00000556689 RAB7AP51149 207 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 DOC2BQ14184 412 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 RBM48Q5RL73 367 aaKnown RBP9.95□□□□□ -0.82
SHMT2-223ENST00000556689 UTF1Q5T230 341 aa9.95□□□□□ -0.82
SHMT2-223ENST00000556689 AADACL4Q5VUY2 407 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms