RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 IFNA21P01568 189 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 MBPP02686 304 aaPredicted RBP8.59□□□□□ -1.03
TMEM260-211ENST00000556648 GRPP07492 148 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 CECR9P0C854 216 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 CEACAM1P13688 526 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF44P15621 663 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 CBR1P16152 277 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 ZP3P21754 424 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 KCNJ3P48549 501 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 IL13RA2Q14627 380 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 RTP5Q14D33 572 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF818PQ6ZRF7 136 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 TBC1D26Q86UD7 250 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 ZADH2Q8N4Q0 377 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 BVESQ8NE79 360 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 UBALD1Q8TB05 177 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 KLF14Q8TD94 323 aaPredicted RBP8.59□□□□□ -1.03
TMEM260-211ENST00000556648 PHYHIPLQ96FC7 376 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 MS4A7Q9GZW8 240 aaPredicted RBP8.59□□□□□ -1.03
TMEM260-211ENST00000556648 SHARPINQ9H0F6 387 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 OR2S2Q9NQN1 319 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 TINAGQ9UJW2 476 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 MEMO1Q9Y316 297 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 PRR14LQ5THK1 2151 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 IQCF6A8MYZ5 107 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 H7C1Q1 480 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 DEGS1O15121 323 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 MPPED1O15442 326 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 MLNRO43193 412 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 DEDDO75618 318 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 CGAP01215 116 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 TPT1P13693 172 aaKnown RBP8.59□□□□□ -1.03
TMEM260-211ENST00000556648 MRPL49Q13405 166 aaKnown RBP8.59□□□□□ -1.03
TMEM260-211ENST00000556648 OR8G1Q15617 311 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 SPIN3Q5JUX0 258 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 FAM209AQ5JX71 171 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 RPL7L1Q6DKI1 246 aaKnown RBP8.59□□□□□ -1.03
TMEM260-211ENST00000556648 ZNF826PQ6ZT77 177 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 LINC00596Q86U02 117 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 GAPTQ8N292 157 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 STPG2Q8N412 459 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 SLC35G3Q8N808 338 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 TMED6Q8WW62 240 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 STARD4Q96DR4 205 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 USB1Q9BQ65 265 aaKnown RBP8.59□□□□□ -1.03
TMEM260-211ENST00000556648 SUCNR1Q9BXA5 334 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 CCL28Q9NRJ3 127 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 ASF1BQ9NVP2 202 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 OR1A1Q9P1Q5 309 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 ZDHHC8Q9ULC8 765 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 KCNIP3Q9Y2W7 256 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 ATP23Q9Y6H3 246 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 CFAP47Q6ZTR5 3102 aa8.59□□□□□ -1.03
TMEM260-211ENST00000556648 CNOT1A5YKK6 2376 aaKnown RBP8.59□□□□□ -1.04
TMEM260-211ENST00000556648 C3orf85A0A1B0GTC6 90 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 K7EPK0 472 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 SLC33A1O00400 549 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 WNT9BO14905 357 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 TNFSF12O43508 249 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 TUSC2O75896 110 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 OR2H2O95918 312 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 IGKV3-15P01624 115 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 TK1P04183 234 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PET100P0DJ07 73 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 RAC2P15153 192 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 HOXC12P31275 282 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 NUP62P37198 522 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 NBL1P41271 181 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 ERVK11-1P61568 191 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 HLA-DRB3P79483 266 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 SRSF7Q16629 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PAN3Q58A45 887 aaKnown RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 ZNF880Q6PDB4 577 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PCSK4Q6UW60 755 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 Q6ZR03 302 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 HSD17B13Q7Z5P4 300 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 BAP18Q8IXM2 172 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 FAM71E2Q8N5Q1 922 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 LRTM2Q8N967 370 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 CCDC71LQ8N9Z2 235 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 SPERTQ8NA61 448 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 OR1S2Q8NGQ3 325 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 KIRREL1Q96J84 757 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PRRX2Q99811 253 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 NRIP2Q9BQI9 281 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 SMIM3Q9BZL3 60 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PLK3Q9H4B4 646 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 DNAJB11Q9UBS4 358 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 AMDHD2Q9Y303 409 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 TRBV6-6A0A0A6YYG2 114 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 IGHV1-18A0A0C4DH31 117 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 NKX2-6A6NCS4 301 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PRSS44E7EML9 344 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 J3QW42 95 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 KLK10O43240 276 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 SLC34A2O95436 690 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PGA5P0DJD9 388 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 RPL12P30050 165 aaKnown RBP8.58□□□□□ -1.04
TMEM260-211ENST00000556648 FAM76BQ5HYJ3 339 aa8.58□□□□□ -1.04
TMEM260-211ENST00000556648 PRAMEF6Q5VXH4 476 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms