RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 HEXA-AS1Q9H8Q6 139 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 GCM1Q9NP62 436 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 BRD7Q9NPI1 651 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 SCRT2Q9NQ03 307 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 MEPEQ9NQ76 525 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-242ENST00000556644 EXOSC3Q9NQT5 275 aaKnown RBP3.38□□□□□ -1.87
ATXN3-242ENST00000556644 NUDT15Q9NV35 164 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 B3GAT1Q9P2W7 334 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 RPS6KB2Q9UBS0 482 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 ZNF222Q9UK12 451 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 ZDHHC8Q9ULC8 765 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 SIRT4Q9Y6E7 314 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-242ENST00000556644 V9GY05 133 aa3.38□□□□□ -1.87
ATXN3-242ENST00000556644 SRRM2Q9UQ35 2752 aaKnown RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 MYCBP2O75592 4640 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 DNAH17Q9UFH2 4485 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 TRBV5-5A0A0J9YX44 114 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 A0A1B0GWA3 101 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 FAM183AA6NL82 134 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 TMEM212A6NML5 194 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 F2RL2O00254 374 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ZNF593O00488 134 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ADAM20O43506 726 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 XRCC3O43542 346 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SSNA1O43805 119 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ICMTO60725 284 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 FCN3O75636 299 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 B3GALNT1O75752 331 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 RBBP9O75884 186 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SCGNO76038 276 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 OR7A10O76100 309 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 NDUFB6O95139 128 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 APOL3O95236 402 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SLC2A10O95528 541 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 IFNA6P05013 189 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 LIPFP07098 398 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 CD14P08571 375 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 CD37P11049 281 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ATF1P18846 271 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 FUT1P19526 365 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 NFYAP23511 347 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 WNT5AP41221 380 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 OR12D2P58182 307 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ACTBP60709 375 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 RPS11P62280 158 aaKnown RBP eCLIP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 PUDPQ08623 228 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 FGL1Q08830 312 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 FHL1Q13642 323 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ALKBH1Q13686 389 aaKnown RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 RBMS2Q15434 407 aaKnown RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 DEFB136Q30KP8 78 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ZNF260Q3ZCT1 412 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 Q499Y3 187 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ALG10BQ5I7T1 473 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 CLVS2Q5SYC1 327 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ZNF684Q5T5D7 378 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ZNF626Q68DY1 528 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 WBP2NLQ6ICG8 309 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 TMEM65Q6PI78 240 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SHFQ7M4L6 423 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SLC16A9Q7RTY1 509 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 FAM220AQ7Z4H9 259 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SLC51BQ86UW2 128 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 MOGAT3Q86VF5 341 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 TMEM123Q8N131 208 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 Q8N1X5 172 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 BOLLQ8N9W6 283 aaKnown RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 NPEPL1Q8NDH3 523 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 DNAAF1Q8NEP3 725 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 OR11H7Q8NGC8 314 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 OR10AD1Q8NGE0 317 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 OR2T4Q8NH00 348 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 PIFOQ8TCI5 191 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 GIMAP1Q8WWP7 306 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 ST8SIA4Q92187 359 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 PELI1Q96FA3 418 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 DERL3Q96Q80 235 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 P2RX4Q99571 388 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 FOXB1Q99853 325 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 NABP2Q9BQ15 211 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SLC25A21Q9BQT8 299 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 EMC6Q9BV81 110 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 COMMD4Q9H0A8 199 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 C20orf85Q9H1P6 137 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 PPIL3Q9H2H8 161 aaKnown RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SCPEP1Q9HB40 452 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 HRASLSQ9HDD0 168 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SLC23A1Q9UHI7 598 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 KCNE5Q9UJ90 142 aa3.37□□□□□ -1.87
ATXN3-242ENST00000556644 APOBP04114 4563 aaKnown RBP3.37□□□□□ -1.87
ATXN3-242ENST00000556644 SORL1Q92673 2214 aa3.36□□□□□ -1.87
ATXN3-242ENST00000556644 TRAV6A0A075B6T7 132 aa3.36□□□□□ -1.87
ATXN3-242ENST00000556644 TRBV5-7A0A0A0MS05 114 aa3.36□□□□□ -1.87
ATXN3-242ENST00000556644 A0A0D9SG52 128 aa3.36□□□□□ -1.87
ATXN3-242ENST00000556644 A0A1W2PPL8 197 aa3.36□□□□□ -1.87
ATXN3-242ENST00000556644 RPS10-NUDT3A0A1W2PQS6 291 aa3.36□□□□□ -1.87
ATXN3-242ENST00000556644 ACOD1A6NK06 481 aa3.36□□□□□ -1.87
ATXN3-242ENST00000556644 SH2D7A6NKC9 451 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-242ENST00000556644 MCRIP1C9JLW8 97 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms