RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 SLC35B3Q9H1N7 401 aa5.35□□□□□ -1.55
TDP1-215ENST00000556498 TCEAL2Q9H3H9 227 aaPredicted RBP5.35□□□□□ -1.55
TDP1-215ENST00000556498 MAP1LC3AQ9H492 121 aa5.35□□□□□ -1.55
TDP1-215ENST00000556498 HES4Q9HCC6 221 aa5.35□□□□□ -1.55
TDP1-215ENST00000556498 MEPEQ9NQ76 525 aaPredicted RBP5.35□□□□□ -1.55
TDP1-215ENST00000556498 MRPS18AQ9NVS2 196 aaKnown RBP5.35□□□□□ -1.55
TDP1-215ENST00000556498 NDUFB11Q9NX14 153 aa5.35□□□□□ -1.55
TDP1-215ENST00000556498 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
TDP1-215ENST00000556498 COMMD9Q9P000 198 aa5.35□□□□□ -1.55
TDP1-215ENST00000556498 ANXA10Q9UJ72 324 aa5.35□□□□□ -1.55
TDP1-215ENST00000556498 KCNS2Q9ULS6 477 aa5.35□□□□□ -1.55
TDP1-215ENST00000556498 RPL36Q9Y3U8 105 aaKnown RBP5.35□□□□□ -1.55
TDP1-215ENST00000556498 LSM5Q9Y4Y9 91 aaKnown RBP5.35□□□□□ -1.55
TDP1-215ENST00000556498 LOC102724200A0A096LPH7 203 aaPredicted RBP5.34□□□□□ -1.55
TDP1-215ENST00000556498 CCDC195A0A1B0GUA6 201 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 TINCRA0A1B0GVN0 87 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 SMIM35A0A1B0GVV1 85 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 CLDN5O00501 218 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 TAAR5O14804 337 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 DHRS3O75911 302 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 LINC00032P0C843 101 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 PGCP20142 388 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 RPS4Y1P22090 263 aaKnown RBP5.34□□□□□ -1.55
TDP1-215ENST00000556498 HRH1P35367 487 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 IER3P46695 156 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 RND2P52198 227 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 EXOSC7Q15024 291 aaKnown RBP5.34□□□□□ -1.55
TDP1-215ENST00000556498 VWC2Q2TAL6 325 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 DCAF4L1Q3SXM0 396 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 TCEAL5Q5H9L2 206 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 SOHLH1Q5JUK2 328 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 AMMECR1LQ6DCA0 310 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 UFSP1Q6NVU6 142 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 SBSNQ6UWP8 590 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 BTNL8Q6UX41 500 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 Q6ZSR6 202 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 Q6ZVL8 140 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 MDGA2Q7Z553 956 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 LRP11Q86VZ4 500 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 CMTM4Q8IZR5 234 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 ZNF567Q8N184 647 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.34□□□□□ -1.55
TDP1-215ENST00000556498 OR2I1PQ8NGU4 316 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 OR52I2Q8NH67 350 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 SLC25A40Q8TBP6 338 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 RPEQ96AT9 228 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 C10orf35Q96D05 121 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 DYNLL2Q96FJ2 89 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 IP6K3Q96PC2 410 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 AP1S3Q96PC3 154 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 GABRG3Q99928 467 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 SLC25A21Q9BQT8 299 aaPredicted RBP5.34□□□□□ -1.55
TDP1-215ENST00000556498 TMEM133Q9H2Q1 129 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 IFI27L2Q9H2X8 130 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 B3GAT2Q9NPZ5 323 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 CISHQ9NSE2 258 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 TMEM106BQ9NUM4 274 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 EHFQ9NZC4 300 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 ST6GALNAC2Q9UJ37 374 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 AJAP1Q9UKB5 411 aaPredicted RBP5.34□□□□□ -1.55
TDP1-215ENST00000556498 VDAC3Q9Y277 283 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 NTNG1Q9Y2I2 539 aa5.34□□□□□ -1.55
TDP1-215ENST00000556498 SCN11AQ9UI33 1791 aa5.34□□□□□ -1.56
TDP1-215ENST00000556498 B4DGG1 531 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 UMAD1C9J7I0 102 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 F5H5K5 113 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 M0R1X1 148 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 SIRPB1O00241 398 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 DHHO43323 396 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 FCGR3BO75015 233 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ZNF217O75362 1048 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 EML2O95834 649 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 HLA-DOAP06340 250 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 HOXB7P09629 217 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 FAM106CPP0CH98 169 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 IGLC2P0DOY2 106 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 IGLC3P0DOY3 106 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 VSIG10L2P0DP72 767 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 MMP9P14780 707 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ORM2P19652 201 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 MALP21145 153 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 DCTP40126 519 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 EFNA5P52803 228 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 UCP3P55916 312 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 WNT3AP56704 352 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 NXPH1P58417 271 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 FAM3BP58499 235 aaPredicted RBP5.33□□□□□ -1.56
TDP1-215ENST00000556498 TPPP2P59282 170 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 ADAM8P78325 824 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 PSG4Q00888 419 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 CXCL9Q07325 125 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 PNRC1Q12796 327 aaPredicted RBP5.33□□□□□ -1.56
TDP1-215ENST00000556498 ADIRFQ15847 76 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 MST1LQ2TV78 715 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 FAM106AQ4KMX7 169 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 GAGE13Q4V321 117 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 KHDC1LQ5JSQ8 128 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 FFAR4Q5NUL3 377 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 LYSMD4Q5XG99 296 aa5.33□□□□□ -1.56
TDP1-215ENST00000556498 PLAG1Q6DJT9 500 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms