RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 UPRTQ96BW1 309 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 C4orf45Q96LM5 186 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 JSRP1Q96MG2 331 aaPredicted RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 AGAP4Q96P64 663 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 DERL3Q96Q80 235 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 PDCD1LG2Q9BQ51 273 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 SOSTQ9BQB4 213 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 C7orf50Q9BRJ6 194 aaKnown RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 OR2B2Q9GZK3 357 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 SLC22A4Q9H015 551 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 MIXL1Q9H2W2 232 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 NAGKQ9UJ70 344 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 FZR1Q9UM11 496 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 HHLA2Q9UM44 414 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 POLR1DQ9Y2S0 133 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 KLF13Q9Y2Y9 288 aaPredicted RBP4.32□□□□□ -1.72
SRP54-211ENST00000556445 R4GMQ9 66 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 V9GYH0 126 aa4.32□□□□□ -1.72
SRP54-211ENST00000556445 LAMA2P24043 3122 aaKnown RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 KBTBD11-OT1A0A1B0GTJ5 212 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 LOC101059948A0A1B0GTJ6 334 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 LRP5LA4QPB2 252 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 IFITM5A6NNB3 132 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 C17orf51A8MQB3 221 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 ZNF878C9JN71 531 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 KLRC4-KLRK1H3BQV0 150 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 TMEM178BH3BS89 294 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 SH2D1BO14796 132 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 MLNRO43193 412 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 GMDSO60547 372 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 HPGDSO60760 199 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 UBL3O95164 117 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 APOHP02749 345 aaPredicted RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 ISG15P05161 165 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 HLA-DOBP13765 273 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 KITLGP21583 273 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 GLRA1P23415 457 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 GDF1P27539 372 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 HSD11B1P28845 292 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 DNASE1L1P49184 302 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 P2RY4P51582 365 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 ZNF133P52736 654 aaPredicted RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 RPS18P62269 152 aaKnown RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 RPS11P62280 158 aaKnown RBP eCLIP4.31□□□□□ -1.72
SRP54-211ENST00000556445 GRB2P62993 217 aaKnown RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 LCN2P80188 198 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 IFITM3Q01628 133 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 Q0VFX4 171 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 FAM189A2Q15884 450 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 ZNF79Q15937 498 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 HIST3H3Q16695 136 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 C10orf128Q5T292 105 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 STPG1Q5TH74 334 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 SLC25A47Q6Q0C1 308 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 STAC2Q6ZMT1 411 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 CATSPERDQ86XM0 798 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 STX12Q86Y82 276 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 FBXL14Q8N1E6 418 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 GBGT1Q8N5D6 347 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 RFLNBQ8N5W9 214 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 SAMD12Q8N8I0 201 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 OR6N1Q8NGY5 312 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 OR2V1Q8NHB1 315 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 CPNE4Q96A23 557 aaPredicted RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 TMEM106AQ96A25 262 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 SLAMF6Q96DU3 332 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 S100A16Q96FQ6 103 aaKnown RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 TXNDC15Q96J42 360 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 TTTY10Q9BZA0 68 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 ABCG5Q9H222 651 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 SAV1Q9H4B6 383 aaPredicted RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 PROK2Q9HC23 129 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 SLC17A5Q9NRA2 495 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 MED29Q9NX70 200 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 GLTPQ9NZD2 209 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 COPZ2Q9P299 210 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 ZNF319Q9P2F9 582 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 CLN8Q9UBY8 286 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 SDK2Q58EX2 2172 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 FREM3P0C091 2139 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 TNRC18O15417 2968 aaPredicted RBP4.31□□□□□ -1.72
SRP54-211ENST00000556445 EML6Q6ZMW3 1958 aa4.31□□□□□ -1.72
SRP54-211ENST00000556445 A0A0J9YW62 118 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 TEX13DA0A0J9YY54 714 aaPredicted RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 A0A1B0GVI7 797 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 TMEM269A0A1B0GVZ9 245 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 NAP1L6A6NFF2 107 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 B4DXG7 233 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 RNASEK-C17orf49H0YIS7 233 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 MAGEB4O15481 346 aaPredicted RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 GSTZ1O43708 216 aaPredicted RBP4.3□□□□□ -1.72
SRP54-211ENST00000556445 NDUFS7O75251 213 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 TRAPPC6AO75865 159 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 CST4P01036 141 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 HPNP05981 417 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 CSF3P09919 207 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 TRAPPC2P0DI81 140 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 TRAPPC2BP0DI82 140 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 LIPCP11150 499 aa4.3□□□□□ -1.72
SRP54-211ENST00000556445 ELK1P19419 428 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms