RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TMEM250H0YL14 139 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 H3BP45 60 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 M0QXV9 152 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 SLC31A1O15431 190 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 POP7O75817 140 aaKnown RBP1.23□□□□□ -2.21
SCFD1-218ENST00000556256 SOX14O95416 240 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 GIMD1P0DJR0 217 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 GABRA1P14867 456 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 CTLA4P16410 223 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 PRPS1L1P21108 318 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 MAGEA3P43357 314 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF83P51522 516 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 TNNC1P63316 161 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 HBG1P69891 147 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 HBG2P69892 147 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 CD164Q04900 197 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 TRAM1Q15629 374 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 Q3ZCU0 254 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 HBMQ6B0K9 141 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 LAMTOR1Q6IAA8 161 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 SSX6Q7RTT6 188 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 TCF24Q7RTU0 167 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 SLC25A45Q8N413 288 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 TWIST2Q8WVJ9 160 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 TMEM239Q8WW34 195 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 TMIGD2Q96BF3 282 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 TRIB3Q96RU7 358 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 LINC01587Q99440 93 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 ANAPC13Q9BS18 74 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 GABARAPL1Q9H0R8 117 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 GOLPH3Q9H4A6 298 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 TMBIM4Q9HC24 238 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 AGPAT3Q9NRZ7 376 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 OR5V1Q9UGF6 321 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 MRM2Q9UI43 246 aaKnown RBP1.23□□□□□ -2.21
SCFD1-218ENST00000556256 U3KQK5 164 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 CACNA1DQ01668 2161 aa1.23□□□□□ -2.21
SCFD1-218ENST00000556256 BRD4O60885 1362 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-218ENST00000556256 A0A0B4J2C4 111 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 A0A1W2PNM2 257 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 UBDO15205 165 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 BRI3O95415 125 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 APOA1P02647 267 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 MLNP12872 115 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 RPA3P35244 121 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-218ENST00000556256 AQP5P55064 265 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 PRDX1Q06830 199 aaKnown RBP1.22□□□□□ -2.21
SCFD1-218ENST00000556256 MMDQ15546 238 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 TRIP13Q15645 432 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-218ENST00000556256 ZBTB6Q15916 424 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 GOLGA7BQ2TAP0 167 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 BSXQ3C1V8 233 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 LGALSLQ3ZCW2 172 aaPredicted RBP1.22□□□□□ -2.21
SCFD1-218ENST00000556256 ZCWPW2Q504Y3 356 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 FBXO48Q5FWF7 155 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 FAM162BQ5T6X4 162 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 LAIR2Q6ISS4 152 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 CLEC20AQ6ZU45 233 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 FAM183BPQ6ZVS7 135 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 COPS6Q7L5N1 327 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 LYZL2Q7Z4W2 148 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 ZNF738Q8NE65 137 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 SNX24Q9Y343 169 aa1.22□□□□□ -2.21
SCFD1-218ENST00000556256 PRR14LQ5THK1 2151 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 A0A1B0GX12 115 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 FAM183AA6NL82 134 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 ZNF879B4DU55 563 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 RNASEK-C17orf49H0YIS7 233 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 PSCAO43653 123 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 SYNGR2O43760 224 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 CDS2O95674 445 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 FADS2O95864 444 aaKnown RBP1.21□□□□□ -2.22
SCFD1-218ENST00000556256 EPPINO95925 133 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 OPN1SWP03999 348 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 HADHBP55084 474 aaKnown RBP1.21□□□□□ -2.22
SCFD1-218ENST00000556256 OR10A3P58181 314 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 BCL2A1Q16548 175 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 NXNL2Q5VZ03 156 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 ELP2Q6IA86 826 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 DGAT2L6Q6ZPD8 337 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 AHSA2Q719I0 299 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 MRPL52Q86TS9 123 aaKnown RBP1.21□□□□□ -2.22
SCFD1-218ENST00000556256 TRIML2Q8N7C3 387 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 GATD1Q8NB37 220 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 FAM45AQ8TCE6 357 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 RORBQ92753 470 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 RAD51AP1Q96B01 352 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 CMBLQ96DG6 245 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 SLC25A44Q96H78 314 aaPredicted RBP1.21□□□□□ -2.22
SCFD1-218ENST00000556256 REEP6Q96HR9 211 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 PRSS27Q9BQR3 290 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 TSSK6Q9BXA6 273 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 MCTS1Q9ULC4 181 aaKnown RBP1.21□□□□□ -2.22
SCFD1-218ENST00000556256 STK38LQ9Y2H1 464 aa1.21□□□□□ -2.22
SCFD1-218ENST00000556256 TBL2Q9Y4P3 447 aaKnown RBP1.21□□□□□ -2.22
SCFD1-218ENST00000556256 ARAP3Q8WWN8 1544 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 A0A1B0GTI1 187 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 OR5H14A6NHG9 310 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 C8orf87E5RJ46 101 aa1.2□□□□□ -2.22
SCFD1-218ENST00000556256 E7EQL1 145 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms