RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ARG1P05089 322 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 CGB3P0DN86 165 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 CGB7P0DN87 165 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 CDK2P24941 298 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 HSPA13P48723 471 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 RAG2P55895 527 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 C17orf58Q2M2W7 97 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 PLA1AQ53H76 456 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 PAN3Q58A45 887 aaKnown RBP11.07□□□□□ -0.64
SNX6-203ENST00000555416 NHLRC3Q5JS37 347 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 RSBN1Q5VWQ0 802 aaPredicted RBP11.07□□□□□ -0.64
SNX6-203ENST00000555416 LIPKQ5VXJ0 399 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 BRICD5Q6PL45 260 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 LRRTM1Q86UE6 522 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 SUMF2Q8NBJ7 301 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 OR13A1Q8NGR1 328 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 DYRK2Q92630 601 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 TMEM203Q969S6 136 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 SSX3Q99909 188 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 ZNF747Q9BV97 191 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 CKLFQ9UBR5 152 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 KIF25Q9UIL4 384 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 VPREB3Q9UKI3 123 aa11.07□□□□□ -0.64
SNX6-203ENST00000555416 MRPS28Q9Y2Q9 187 aaKnown RBP11.07□□□□□ -0.64
SNX6-203ENST00000555416 UBE2J1Q9Y385 318 aaPredicted RBP11.07□□□□□ -0.64
SNX6-203ENST00000555416 TRGV10A0A0A0MS01 117 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 IGHV2-26A0A0B4J1V2 119 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 NDUFA7O95182 113 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 VHLP40337 213 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 RAB13P51153 203 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 KRTAP10-3P60369 221 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 RPS25P62851 125 aaKnown RBP11.06□□□□□ -0.64
SNX6-203ENST00000555416 DYNC1I2Q13409 638 aaKnown RBP11.06□□□□□ -0.64
SNX6-203ENST00000555416 TPBGQ13641 420 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 LY6EQ16553 131 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 GLIPR1L1Q6UWM5 242 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 TMEM91Q6ZNR0 172 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 PRSS48Q7RTY5 328 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 TMEM104Q8NE00 496 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 OR13D1Q8NGV5 346 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 DPCDQ9BVM2 203 aaPredicted RBP11.06□□□□□ -0.64
SNX6-203ENST00000555416 CCDC90BQ9GZT6 254 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 TMEM133Q9H2Q1 129 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 BANF2Q9H503 90 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 RAB26Q9ULW5 256 aa11.06□□□□□ -0.64
SNX6-203ENST00000555416 OR7C1O76099 320 aaPredicted RBP11.05□□□□□ -0.64
SNX6-203ENST00000555416 CSTBP04080 98 aaKnown RBP11.05□□□□□ -0.64
SNX6-203ENST00000555416 CRYBA1P05813 215 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 HSMCR30P0CW71 290 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 LGALS4P56470 323 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 SSX2Q16385 188 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 LRRC75BQ2VPJ9 315 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 CCBE1Q6UXH8 406 aaPredicted RBP11.05□□□□□ -0.64
SNX6-203ENST00000555416 HEPN1Q6WQI6 88 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 Q6ZSV7 163 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 CEACAM19Q7Z692 300 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 FOXRED1Q96CU9 486 aaPredicted RBP11.05□□□□□ -0.64
SNX6-203ENST00000555416 GFI1Q99684 422 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 KCNK15Q9H427 330 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 IFT22Q9H7X7 185 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 ZNF286AQ9HBT8 521 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 TAS2R3Q9NYW6 316 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 MMP24Q9Y5R2 645 aa11.05□□□□□ -0.64
SNX6-203ENST00000555416 MEIKINA0A087WXM9 373 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 FUOMA2VDF0 154 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 CHST1O43916 411 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 UCHL1P09936 223 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 MAPK3P27361 379 aaPredicted RBP11.04□□□□□ -0.64
SNX6-203ENST00000555416 GLP1RP43220 463 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 GPR50Q13585 617 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 RBM48Q5RL73 367 aaKnown RBP11.04□□□□□ -0.64
SNX6-203ENST00000555416 AWAT2Q6E213 333 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 FAM53AQ6NSI3 398 aaPredicted RBP11.04□□□□□ -0.64
SNX6-203ENST00000555416 CDH26Q8IXH8 852 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 ABHD12Q8N2K0 398 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 MS4A15Q8N5U1 240 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 OR4P4Q8NGL7 312 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 LINC01006Q8NI28 216 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 MRGPRDQ8TDS7 321 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 UFD1Q92890 307 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 S100A13Q99584 98 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 MGLLQ99685 303 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 CLEC7AQ9BXN2 247 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 TBL2Q9Y4P3 447 aaKnown RBP11.04□□□□□ -0.64
SNX6-203ENST00000555416 HILPDAQ9Y5L2 63 aa11.04□□□□□ -0.64
SNX6-203ENST00000555416 NBEAL1Q6ZS30 2694 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 KBTBD11-OT1A0A1B0GTJ5 212 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 BTBD17A6NE02 478 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 IGHV3-7P01780 117 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 GTF2F2P13984 249 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 CPEP16870 476 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 SSTR5P35346 364 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 PAX5Q02548 391 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 MLLT11Q13015 90 aaPredicted RBP11.03□□□□□ -0.64
SNX6-203ENST00000555416 FAM189A2Q15884 450 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 SSX1Q16384 188 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 FBLN7Q53RD9 439 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 ATAD3CQ5T2N8 411 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 SIGIRRQ6IA17 410 aa11.03□□□□□ -0.64
SNX6-203ENST00000555416 OR10K2Q6IF99 312 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms