RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 AP3S1Q92572 193 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 CORO2AQ92828 525 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 COQ2Q96H96 371 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 NEDD4LQ96PU5 975 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 ABCG5Q9H222 651 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 PPA2Q9H2U2 334 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 LPAR3Q9UBY5 353 aa10.47□□□□□ -0.73
SYNE2-219ENST00000555323 A0A0A6YYH2 397 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 A0A0G2JMP0 313 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 A0A0X1KG70 313 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 CCDC160A6NGH7 325 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 A6NHS1 94 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 A6NJ64 397 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 J3QLI3 93 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 SCGNO76038 276 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 LY6G6DO95868 133 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 PPIAL4GP0DN37 164 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 SOX6P35712 828 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 P2RX3P56373 397 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 RPL31P62899 125 aaKnown RBP10.46□□□□□ -0.73
SYNE2-219ENST00000555323 AESQ08117 197 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 PLAC9Q5JTB6 97 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 RSBN1Q5VWQ0 802 aaPredicted RBP10.46□□□□□ -0.73
SYNE2-219ENST00000555323 TMEM200BQ69YZ2 307 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 BRICD5Q6PL45 260 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 Q6ZTK2 550 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 OR4M2Q8NGB6 313 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 OR10R2Q8NGX6 335 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 PLPPR1Q8TBJ4 325 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 SLC25A38Q96DW6 304 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 SMR3AQ99954 134 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 LPAR2Q9HBW0 351 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.46□□□□□ -0.73
SYNE2-219ENST00000555323 C19orf12Q9NSK7 152 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 PLEKHJ1Q9NW61 149 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 RHBDL2Q9NX52 303 aa10.46□□□□□ -0.73
SYNE2-219ENST00000555323 CCDC59Q9P031 241 aaKnown RBP10.46□□□□□ -0.73
SYNE2-219ENST00000555323 CELSR1Q9NYQ6 3014 aa10.46□□□□□ -0.74
SYNE2-219ENST00000555323 ACANP16112 2415 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 CSPG4Q6UVK1 2322 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 ARHGAP32A7KAX9 2087 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 A0A075B6Q4 140 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 hADV38S2A0JD32 116 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 POM121CA8CG34 1229 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 MT-ND4P03905 459 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 CGB3P0DN86 165 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 CGB7P0DN87 165 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 GLIPR1P48060 266 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 EDDM3BP56851 147 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 ARL6IP1Q15041 203 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 MOGAT2Q3SYC2 334 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 KRBOX4Q5JUW0 171 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 DCAF12L2Q5VW00 463 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 FOXB2Q5VYV0 432 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 BTNL3Q6UXE8 466 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF497Q6ZNH5 498 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 C6orf201Q7Z4U5 140 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 C11orf42Q8N5U0 333 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 OR4M1Q8NGD0 313 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 H1FXQ92522 213 aaKnown RBP10.45□□□□□ -0.74
SYNE2-219ENST00000555323 RAB3CQ96E17 227 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 SULT4A1Q9BR01 284 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 FAAP24Q9BTP7 215 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 TMPRSS13Q9BYE2 586 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 SLIRPQ9GZT3 109 aaKnown RBP10.45□□□□□ -0.74
SYNE2-219ENST00000555323 NXF2Q9GZY0 626 aaKnown RBP10.45□□□□□ -0.74
SYNE2-219ENST00000555323 ATG5Q9H1Y0 275 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 BATF3Q9NR55 127 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 TMEM160Q9NX00 188 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 KCNK7Q9Y2U2 307 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 KPTNQ9Y664 436 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 LINC00312Q9Y6C7 94 aa10.45□□□□□ -0.74
SYNE2-219ENST00000555323 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.74
SYNE2-219ENST00000555323 ABCA2Q9BZC7 2435 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 A0A1W2PPH5 198 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 ODAMA1E959 279 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 M0R1W7 72 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 HSPB6O14558 160 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 APOA1P02647 267 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF16P17020 682 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-219ENST00000555323 DLX6P56179 175 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 EDDM3AQ14507 147 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 ATXN7L3Q14CW9 347 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-219ENST00000555323 UBE2NLQ5JXB2 153 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 MZT2AQ6P582 158 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 CLEC9AQ6UXN8 241 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 TCF23Q7RTU1 214 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 CMTM4Q8IZR5 234 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 KIR3DL3Q8N743 410 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 TPRX1Q8N7U7 411 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 ZNF565Q8N9K5 539 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 S100A16Q96FQ6 103 aaKnown RBP10.44□□□□□ -0.74
SYNE2-219ENST00000555323 ARHGAP5-AS1Q96IT6 56 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 PECRQ9BY49 303 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 RIMS4Q9H426 269 aaPredicted RBP10.44□□□□□ -0.74
SYNE2-219ENST00000555323 LINC00574Q9H8X3 128 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 UNKLQ9H9P5 680 aaKnown RBP10.44□□□□□ -0.74
SYNE2-219ENST00000555323 TAS2R3Q9NYW6 316 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 OR6C3Q9NZP0 311 aa10.44□□□□□ -0.74
SYNE2-219ENST00000555323 COMMD3Q9UBI1 195 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms