RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 AURKAIP1Q9NWT8 199 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 B9D1Q9UPM9 204 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 AKR7A2O43488 359 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 DHRS3O75911 302 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF25P17030 456 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 C15orf39Q6ZRI6 1047 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 NANOGP1Q8N7R0 232 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 RND1Q92730 232 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM191AQ9H0A3 160 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 C11orf94C9JXX5 98 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 HAND1O96004 215 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 GALNSP34059 522 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 C19orf48Q6RUI8 117 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 LIAT1Q6ZQX7 453 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 MS4A4AQ96JQ5 239 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 LAMB1P07942 1786 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 CTSLP07711 333 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 SLC35B1P78383 322 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 FUT7Q11130 342 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM171Q8WVE6 324 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 LRRC61Q9BV99 259 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 HILPDAQ9Y5L2 63 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 IGKV6-21A0A0C4DH24 114 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 GAGE10A6NGK3 116 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 IGHV4-34P06331 123 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 PATE4P0C8F1 98 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 IER3P46695 156 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 CCR5P51681 352 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 DYNLT3P51808 116 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 FABP5Q01469 135 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 FZD5Q13467 585 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 COTL1Q14019 142 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 PSG5Q15238 335 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 FAM74A4Q5TZK3 123 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 NAT8Q9UHE5 227 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 CST2P09228 141 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 ASAH1Q13510 395 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 R3HDM4Q96D70 268 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 RAB40CQ96S21 281 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 SPAG8Q99932 426 aaPredicted RBP6.11□□□□□ -1.43
SYNE2-216ENST00000555002 GPR61Q9BZJ8 451 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 MMDQ15546 238 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 KRTCAP3Q53RY4 240 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 Q8WTZ3 238 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 MMP25Q9NPA2 562 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 CMC2Q9NRP2 79 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 ITGB4P16144 1822 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 PYCARD-AS1I3L0S3 204 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 PIMREGQ9BSJ6 248 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 BTAF1O14981 1849 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 A0A1B0GU03 582 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 TARM1B6A8C7 271 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 K7ERU9 68 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 MPDU1O75352 247 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 LGALS3P17931 250 aaKnown RBP6.11□□□□□ -1.43
SYNE2-216ENST00000555002 SLC6A1P30531 599 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 SPEM1Q8N4L4 309 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 OR10D3Q8NH80 312 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 C4orf45Q96LM5 186 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 PRR13Q9NZ81 148 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM238LA0A1B0GVL6 79 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 A6NJY4 79 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 SLC17A2O00624 439 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 OR1K1Q8NGR3 316 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 PDLIM5Q96HC4 596 aaKnown RBP6.11□□□□□ -1.43
SYNE2-216ENST00000555002 OR6C3Q9NZP0 311 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 HEATR5AQ86XA9 2040 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM189-UBE2V1I3L0A0 370 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 IGKV3-20P01619 116 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 SNRPCP09234 159 aaKnown RBP6.11□□□□□ -1.43
SYNE2-216ENST00000555002 SLC23A3Q6PIS1 610 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 TRAV8-7A0A075B6U6 113 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 IFITM5A6NNB3 132 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 RER1O15258 196 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 WDR25Q64LD2 544 aaPredicted RBP6.11□□□□□ -1.43
SYNE2-216ENST00000555002 REC114Q7Z4M0 266 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 POMT2Q9UKY4 750 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 CCL19Q99731 98 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 KLK15Q9H2R5 256 aa6.11□□□□□ -1.43
SYNE2-216ENST00000555002 MRPS16Q9Y3D3 137 aaKnown RBP6.11□□□□□ -1.43
SYNE2-216ENST00000555002 PRRT4C9JH25 899 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ANKRD55Q3KP44 614 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 PERPQ96FX8 193 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 DUXBA0A1W2PPF3 345 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 AP4M1O00189 453 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 DNAL4O96015 105 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 RPS4Y1P22090 263 aaKnown RBP6.1□□□□□ -1.43
SYNE2-216ENST00000555002 SUMO3P55854 103 aaPredicted RBP6.1□□□□□ -1.43
SYNE2-216ENST00000555002 LDLRAD3Q86YD5 345 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 GUCD1Q96NT3 240 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 OR2A5Q96R48 311 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 NEU1Q99519 415 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 C3orf85A0A1B0GTC6 90 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 A0A1W2PPC4 97 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 MFAP4P55083 255 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 TSPO2Q5TGU0 170 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 NSUN5P2Q63ZY6 315 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ACER3Q9NUN7 267 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 LMO7DNF2Z398 122 aa6.1□□□□□ -1.43
SYNE2-216ENST00000555002 ABLIM3O94929 683 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms