RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CALCRP30988 508 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 FIGNL2A6NMB9 653 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 CD1AP06126 327 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 FABP6P51161 128 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 EIF4E3Q8N5X7 224 aaKnown RBP14.41□□□□□ -0.1
PCNX1-209ENST00000554879 PP6455Q8WZ26 134 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 PPP1R14DQ9NXH3 145 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 GRPP07492 148 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 SNAI3Q3KNW1 292 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 BRICD5Q6PL45 260 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 GGNQ86UU5 652 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 EHFQ9NZC4 300 aa14.41□□□□□ -0.1
PCNX1-209ENST00000554879 CADP27708 2225 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 A0A1W2PP11 408 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 DUSP1P28562 367 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 RTL6Q6ICC9 239 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 CISD2Q8N5K1 135 aaKnown RBP14.4□□□□□ -0.1
PCNX1-209ENST00000554879 SLC25A38Q96DW6 304 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 SCNM1Q9BWG6 230 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 BORCS7-ASMTA0A0B4J1R7 106 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 XRCC2O43543 280 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 BMP5P22003 454 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 ENDOGQ14249 297 aaKnown RBP14.4□□□□□ -0.1
PCNX1-209ENST00000554879 IL34Q6ZMJ4 242 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 COMMD1Q8N668 190 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 ZIC4Q8N9L1 334 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 NECAP1Q8NC96 275 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 SPTBN4Q9H254 2564 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 TRBV5-7A0A0A0MS05 114 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 PRRG2O14669 202 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 HIST1H1BP16401 226 aaKnown RBP14.4□□□□□ -0.1
PCNX1-209ENST00000554879 OPRM1P35372 400 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 THBS4P35443 961 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 LHX2P50458 406 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 HAGHQ16775 308 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 OR10S1Q8NGN2 331 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 COL25A1Q9BXS0 654 aaPredicted RBP14.4□□□□□ -0.1
PCNX1-209ENST00000554879 SDCBPO00560 298 aaPredicted RBP14.4□□□□□ -0.1
PCNX1-209ENST00000554879 PI3P19957 117 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 SELENOVP59797 346 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 IKZF1Q13422 519 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 ASCL5Q7RTU5 278 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 GABRG1Q8N1C3 465 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 FZR1Q9UM11 496 aa14.4□□□□□ -0.1
PCNX1-209ENST00000554879 C14orf166Q9Y224 244 aaKnown RBP14.4□□□□□ -0.1
PCNX1-209ENST00000554879 PKDREJQ9NTG1 2253 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 BPNT1O95861 308 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 MPGP29372 298 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 PPA1Q15181 289 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 MIDNQ504T8 468 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 S100A7AQ86SG5 101 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 NPDC1Q9NQX5 325 aaPredicted RBP14.39□□□□□ -0.11
PCNX1-209ENST00000554879 TIMM8AO60220 97 aaPredicted RBP14.39□□□□□ -0.11
PCNX1-209ENST00000554879 RPLP1P05386 114 aaKnown RBP14.39□□□□□ -0.11
PCNX1-209ENST00000554879 CHRM2P08172 466 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 GPM6AP51674 278 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 HERV-K104P61576 105 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 MEF2DQ14814 521 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 GUK1Q16774 197 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 GFI1BQ5VTD9 330 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 MRPL37Q9BZE1 423 aaKnown RBP14.39□□□□□ -0.11
PCNX1-209ENST00000554879 RCC2Q9P258 522 aaKnown RBP14.39□□□□□ -0.11
PCNX1-209ENST00000554879 TRGC2P03986 189 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 CLDN18P56856 261 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 SLC22A25Q6T423 547 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 UNQ6494/PRO21346Q6UXR6 183 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 TMEM123Q8N131 208 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 TMEM54Q969K7 222 aa14.39□□□□□ -0.11
PCNX1-209ENST00000554879 HPNP05981 417 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 ADCYAP1P18509 176 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 FBXW9Q5XUX1 488 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 GVQW1Q8N7I0 195 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
PCNX1-209ENST00000554879 FREM1Q5H8C1 2179 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 EML6Q6ZMW3 1958 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 ZNF816-ZNF321PA0A0X1KG74 233 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 AGFG2O95081 481 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 H3F3AP84243 136 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 PIP4P1Q86T03 277 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 MARS2Q96GW9 593 aaKnown RBP14.38□□□□□ -0.11
PCNX1-209ENST00000554879 TRAV34A0A0B4J273 112 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 PET100P0DJ07 73 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 ZNF708P17019 499 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 ACKR3P25106 362 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 FOXG1P55316 489 aaPredicted RBP14.38□□□□□ -0.11
PCNX1-209ENST00000554879 B3GALT5-AS1P59052 145 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 NUTF2P61970 127 aaKnown RBP14.38□□□□□ -0.11
PCNX1-209ENST00000554879 CYCSP99999 105 aaKnown RBP14.38□□□□□ -0.11
PCNX1-209ENST00000554879 DHRS11Q6UWP2 260 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 SMIM15Q7Z3B0 74 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 SLC35G3Q8N808 338 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 RAB39BQ96DA2 213 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 ARHGAP5-AS1Q96IT6 56 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 NICN1Q9BSH3 213 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 ZNF716A6NP11 495 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 CRYABP02511 175 aaKnown RBP14.38□□□□□ -0.11
PCNX1-209ENST00000554879 C10orf128Q5T292 105 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 FDX2Q6P4F2 183 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 GFRALQ6UXV0 394 aa14.38□□□□□ -0.11
PCNX1-209ENST00000554879 WDR13Q9H1Z4 485 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms