RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 RBM11P57052 281 aaKnown RBP8.21□□□□□ -1.09
SYNE2-213ENST00000554805 SRPXP78539 464 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 RUNX1Q01196 453 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 WDR5BQ86VZ2 330 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 AGBL5Q8NDL9 886 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 CPT1CQ8TCG5 803 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 NTNG2Q96CW9 530 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 HIST1H2AAQ96QV6 131 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 WNT5BQ9H1J7 359 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 PLEKHF2Q9H8W4 249 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 RNF122Q9H9V4 155 aa8.21□□□□□ -1.09
SYNE2-213ENST00000554805 LAMA5O15230 3695 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF724A8MTY0 619 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 DKK1O94907 266 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 UMODP07911 640 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 COX6A1P12074 109 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 DYNLT3P51808 116 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 RAB2AP61019 212 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 RHEBQ15382 184 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 FOXL2NBQ6ZUU3 175 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 MRPL21Q7Z2W9 205 aaKnown RBP8.21□□□□□ -1.1
SYNE2-213ENST00000554805 GAPTQ8N292 157 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 OR56B2PQ8NGI1 322 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 OR10D3Q8NH80 312 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 BOD1Q96IK1 185 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF251Q9BRH9 671 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 TCEAL7Q9BRU2 100 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 OR51B6Q9H340 312 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 LIPGQ9Y5X9 500 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 EML6Q6ZMW3 1958 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 ROS1P08922 2347 aa8.21□□□□□ -1.1
SYNE2-213ENST00000554805 FBP1P09467 338 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 SCTP09683 121 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 BCL3P20749 454 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 NTF4P34130 210 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 GPM6AP51674 278 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 SUCLG1P53597 346 aaKnown RBP8.2□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM211Q6ICI0 200 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM252Q8N6L7 170 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 OR51H1Q8NH63 302 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 ABHD3Q8WU67 409 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 IMMP1LQ96LU5 166 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 ARV1Q9H2C2 271 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 CCL28Q9NRJ3 127 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 DECR2Q9NUI1 292 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 MIOXQ9UGB7 285 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF587BE7ETH6 402 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 AP4M1O00189 453 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF16P17020 682 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-213ENST00000554805 S100GP29377 79 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 RAB1AP62820 205 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 CMTM1Q8IZ96 169 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 OR2V1Q8NHB1 315 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF845Q96IR2 970 aaPredicted RBP8.2□□□□□ -1.1
SYNE2-213ENST00000554805 SF3B5Q9BWJ5 86 aaKnown RBP8.2□□□□□ -1.1
SYNE2-213ENST00000554805 TMEM222Q9H0R3 208 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 UNKLQ9H9P5 680 aaKnown RBP8.2□□□□□ -1.1
SYNE2-213ENST00000554805 PROK2Q9HC23 129 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 NBASA2RRP1 2371 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 hCG_38984A0A1B0GV85 526 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 LAMTOR5O43504 91 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 CDS2O95674 445 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 RFPL3SP0C7P2 107 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 AGAP20933 346 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 ZNF154Q13106 437 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 MKXQ8IYA7 352 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 IL22RA1Q8N6P7 574 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 LRTM2Q8N967 370 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 LYPD6BQ8NI32 183 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 SNIP1Q8TAD8 396 aaKnown RBP8.2□□□□□ -1.1
SYNE2-213ENST00000554805 IL1F10Q8WWZ1 152 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 RDH5Q92781 318 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 PRRG4Q9BZD6 226 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 GPR35Q9HC97 309 aa8.2□□□□□ -1.1
SYNE2-213ENST00000554805 CFAP47Q6ZTR5 3102 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 TRAPPC2LH3BP13 241 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 H3BQ15 152 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 K7N7A8 449 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 HS3ST1O14792 307 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 CHST1O43916 411 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 MRPL33O75394 65 aaKnown RBP8.19□□□□□ -1.1
SYNE2-213ENST00000554805 IFNA5P01569 189 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 SRD5A2P31213 254 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 EIF2S3P41091 472 aaKnown RBP8.19□□□□□ -1.1
SYNE2-213ENST00000554805 UCP3P55916 312 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 CLDN15P56746 228 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 MLF1P58340 268 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 RPL23AP62750 156 aaKnown RBP8.19□□□□□ -1.1
SYNE2-213ENST00000554805 PRR18Q8N4B5 295 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 OR4D5Q8NGN0 318 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 SAP25Q8TEE9 199 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 WDR54Q9H977 334 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 POLEQ07864 2286 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 C5orf49A4QMS7 147 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 H0YL77 283 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 UBE2CO00762 179 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 YIF1AO95070 293 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 HLA-HP01893 362 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 SERPINE2P07093 398 aa8.19□□□□□ -1.1
SYNE2-213ENST00000554805 RND3P61587 244 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms