RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 FSTP19883 344 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 HTR1DP28221 377 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 PTGFRP43088 359 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 GLIPR1P48060 266 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 KCNJ3P48549 501 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 EFNB2P52799 333 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 BDH1Q02338 343 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 SCN1BQ07699 218 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 ST3GAL4Q11206 333 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 DYNC1I2Q13409 638 aaKnown RBP8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 RSU1Q15404 277 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 SSX2Q16385 188 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 Q499Y3 187 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 NHLRC3Q5JS37 347 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 KRBOX4Q5JUW0 171 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 LDLRAD2Q5SZI1 272 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 DYNAPQ8N1N2 210 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 OR2T6Q8NHC8 308 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 ZNF596Q8TC21 504 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 GGHQ92820 318 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 GHSRQ92847 366 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 CREB3L1Q96BA8 519 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 COQ2Q96H96 371 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 PGLYRP3Q96LB9 341 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 IFT22Q9H7X7 185 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 DCLRE1BQ9H816 532 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 PAK1IP1Q9NWT1 392 aaPredicted RBP8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 CKLFQ9UBR5 152 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 CLEC2DQ9UHP7 191 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 PSORS1C1Q9UIG5 152 aa8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 SIRT4Q9Y6E7 314 aaPredicted RBP8.4□□□□□ -1.06
PTCD2P1-201ENST00000554393 A6NDX4 124 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 CHST1O43916 411 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 ZNF780AO75290 641 aaPredicted RBP8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 IGLV1-47P01700 117 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 CD1AP06126 327 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 GNAO1P09471 354 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 CDK2P24941 298 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 PAX6P26367 422 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 BDKRB2P30411 391 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 ZNF93P35789 620 aaPredicted RBP8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 OR3A4PP47883 348 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 RIPK1Q13546 671 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 ATXN7L3Q14CW9 347 aaPredicted RBP8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 FAM189A2Q15884 450 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 PAN3Q58A45 887 aaKnown RBP8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 DDI2Q5TDH0 399 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 PRAMEF5Q5TYX0 476 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 LAIR2Q6ISS4 152 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 LINC00596Q86U02 117 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 SATL1Q86VE3 508 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 Q8N2B8 174 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 ABHD12Q8N2K0 398 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 OR4D6Q8NGJ1 314 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 OR4P4Q8NGL7 312 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 NDNFQ8TB73 568 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 THRSPQ92748 146 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 CITED4Q96RK1 184 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 BARHL1Q9BZE3 327 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 FAM192AQ9GZU8 254 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 METTL9Q9H1A3 318 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 MMP27Q9H306 513 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 LINC00574Q9H8X3 128 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 PCDHB16Q9NRJ7 776 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 DPM3Q9P2X0 92 aa8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 PRKDCP78527 4128 aaKnown RBP8.39□□□□□ -1.07
PTCD2P1-201ENST00000554393 TRBV5-7A0A0A0MS05 114 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 TRAV24A0A0B4J272 114 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 KBTBD11-OT1A0A1B0GTJ5 212 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 MEGF11A6BM72 1044 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 FAM90A22PA8MWA6 464 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 H3BUI4 141 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 F2RL2O00254 374 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 MYL12BO14950 172 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 MMP23AO75900 390 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 CSTBP04080 98 aaKnown RBP8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 CGB3P0DN86 165 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 CGB7P0DN87 165 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 CEACAM3P40198 252 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 ARHGDIBP52566 201 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 WNT4P56705 351 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 RBM11P57052 281 aaKnown RBP8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 RPS11P62280 158 aaKnown RBP eCLIP8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 GPR176Q14439 515 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 HERPUD1Q15011 391 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 C2orf68Q2NKX9 166 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 MPV17LQ2QL34 196 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 PIGYQ3MUY2 71 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 RNLSQ5VYX0 342 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 CCBE1Q6UXH8 406 aaPredicted RBP8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 Q6ZTK2 550 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 C16orf82Q7Z2V1 217 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 CDH26Q8IXH8 852 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 OSR2Q8N2R0 312 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 ZNF565Q8N9K5 539 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 OR13C5Q8NGS8 318 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 TFAP2CQ92754 450 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 NR1H4Q96RI1 486 aaPredicted RBP8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 S100A13Q99584 98 aa8.38□□□□□ -1.07
PTCD2P1-201ENST00000554393 PPIL3Q9H2H8 161 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms