RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 COQ2Q96H96 371 aa10.12□□□□□ -0.79
SHMT2-209ENST00000553949 CYYR1Q96J86 154 aa10.12□□□□□ -0.79
SHMT2-209ENST00000553949 SULT4A1Q9BR01 284 aa10.12□□□□□ -0.79
SHMT2-209ENST00000553949 DCUN1D5Q9BTE7 237 aa10.12□□□□□ -0.79
SHMT2-209ENST00000553949 SLIRPQ9GZT3 109 aaKnown RBP10.12□□□□□ -0.79
SHMT2-209ENST00000553949 MMP26Q9NRE1 261 aa10.12□□□□□ -0.79
SHMT2-209ENST00000553949 C19orf12Q9NSK7 152 aa10.12□□□□□ -0.79
SHMT2-209ENST00000553949 PLEKHJ1Q9NW61 149 aa10.12□□□□□ -0.79
SHMT2-209ENST00000553949 HIF1ANQ9NWT6 349 aa10.12□□□□□ -0.79
SHMT2-209ENST00000553949 PPIAL4CA0A0B4J2A2 164 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 IGHV2-70DA0A0C4DH43 119 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 FUOMA2VDF0 154 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 ENSAO43768 121 aaKnown RBP10.11□□□□□ -0.79
SHMT2-209ENST00000553949 CD5LO43866 347 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 SCGNO76038 276 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 GLIPR1P48060 266 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 DVL1P1P54792 670 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-209ENST00000553949 PAX5Q02548 391 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 PLAC9Q5JTB6 97 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 RSBN1Q5VWQ0 802 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-209ENST00000553949 Q6ZTK2 550 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 GLCCI1Q86VQ1 547 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 CMTM4Q8IZR5 234 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 FAM185AQ8N0U4 392 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 TPRX1Q8N7U7 411 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 LY6G5BQ8NDX9 201 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 C8orf46Q8TAG6 207 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 PLPPR1Q8TBJ4 325 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 RAB3CQ96E17 227 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 ARHGAP5-AS1Q96IT6 56 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 CMTM3Q96MX0 182 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 NUDT16L1Q9BRJ7 211 aaKnown RBP10.11□□□□□ -0.79
SHMT2-209ENST00000553949 FAAP24Q9BTP7 215 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 ABCG5Q9H222 651 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 BATF3Q9NR55 127 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 ING3Q9NXR8 418 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 HSF4Q9ULV5 492 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 INSIG2Q9Y5U4 225 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 FLNAP21333 2647 aaKnown RBP10.11□□□□□ -0.79
SHMT2-209ENST00000553949 CR1P17927 2039 aa10.11□□□□□ -0.79
SHMT2-209ENST00000553949 MALRD1Q5VYJ5 2156 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 A0A0G2JMP0 313 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 A0A0X1KG70 313 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 KIR2DS1A0A191URI9 304 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 A0A1W2PQ09 198 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 hADV38S2A0JD32 116 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 TMEM30CPA0ZSE6 113 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 ODAMA1E959 279 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 UBE2QL1A1L167 161 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 HPGDSO60760 199 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 APOA1P02647 267 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 LIPFP07098 398 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 PPIAL4GP0DN37 164 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 MEF2CQ06413 473 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-209ENST00000553949 TMEM200BQ69YZ2 307 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 SLC35E4Q6ICL7 350 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 BTNL3Q6UXE8 466 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 OR4M2Q8NGB6 313 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 DYRK2Q92630 601 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 PHF21AQ96BD5 680 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 S100A16Q96FQ6 103 aaKnown RBP10.1□□□□□ -0.79
SHMT2-209ENST00000553949 SMR3AQ99954 134 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 PECRQ9BY49 303 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 NXF2Q9GZY0 626 aaKnown RBP10.1□□□□□ -0.79
SHMT2-209ENST00000553949 ETAA1Q9NY74 926 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 LPAR3Q9UBY5 353 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 KCNK7Q9Y2U2 307 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 MED13LQ71F56 2210 aa10.1□□□□□ -0.79
SHMT2-209ENST00000553949 A0A075B6Q4 140 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 MEIKINA0A087WXM9 373 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 A0A0A6YYH2 397 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 MEX3AA1L020 520 aaKnown RBP10.09□□□□□ -0.79
SHMT2-209ENST00000553949 A6NJ64 397 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 MFNGO00587 321 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 CA11O75493 328 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 LY6G6DO95868 133 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 MT-ND4P03905 459 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 EIF4EP06730 217 aaKnown RBP10.09□□□□□ -0.79
SHMT2-209ENST00000553949 HIST1H1DP16402 221 aaKnown RBP10.09□□□□□ -0.79
SHMT2-209ENST00000553949 GNB3P16520 340 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 GATA3P23771 443 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 ZNF273Q14593 569 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 DCAF12L2Q5VW00 463 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 ZNF497Q6ZNH5 498 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 TCF23Q7RTU1 214 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 GAPTQ8N292 157 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 MCFD2Q8NI22 146 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 DMRTB1Q96MA1 342 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 NCOR1P1Q9H4R4 102 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 ZMAT3Q9HA38 289 aaKnown RBP10.09□□□□□ -0.79
SHMT2-209ENST00000553949 DIABLOQ9NR28 239 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 AK3Q9UIJ7 227 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 KIF25Q9UIL4 384 aa10.09□□□□□ -0.79
SHMT2-209ENST00000553949 ANK3Q12955 4377 aaKnown RBP10.08□□□□□ -0.8
SHMT2-209ENST00000553949 TRGV10A0A0A0MS01 117 aa10.08□□□□□ -0.8
SHMT2-209ENST00000553949 A0A1W2PPH5 198 aa10.08□□□□□ -0.8
SHMT2-209ENST00000553949 SERPINE3A8MV23 424 aa10.08□□□□□ -0.8
SHMT2-209ENST00000553949 CTDSP2O14595 271 aa10.08□□□□□ -0.8
SHMT2-209ENST00000553949 ELK1P19419 428 aa10.08□□□□□ -0.8
SHMT2-209ENST00000553949 CDK2P24941 298 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms