RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ZNF676Q8N7Q3 588 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 C5orf56Q8N8D9 126 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 OR4P4Q8NGL7 312 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 PHLDA1Q8WV24 401 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-223ENST00000553686 ZNF799Q96GE5 643 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 ZNF714Q96N38 554 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 CHCHD6Q9BRQ6 235 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 TMEM133Q9H2Q1 129 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 ABCB9Q9NP78 766 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 ZNF222Q9UK12 451 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 PYCARDQ9ULZ3 195 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 WSB1Q9Y6I7 421 aa4.39□□□□□ -1.71
ATXN3-223ENST00000553686 ARRDC5A6NEK1 342 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 RFPL4AA6NLU0 287 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 RFPL4AL1F8VTS6 287 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 H7C1C5 153 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 XRCC2O43543 280 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 MTRF1O75570 445 aaKnown RBP4.38□□□□□ -1.71
ATXN3-223ENST00000553686 TPPPO94811 219 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 LYPD3O95274 346 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 IFNA4P05014 189 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 TFAP2AP05549 437 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 PIPP12273 146 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-223ENST00000553686 TMEM11P17152 192 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 LBPP18428 481 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 CFL1P23528 166 aaKnown RBP4.38□□□□□ -1.71
ATXN3-223ENST00000553686 PSMB8P28062 276 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 CD81P60033 236 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 LCN6P62502 163 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 MEF2CQ06413 473 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-223ENST00000553686 TNFRSF9Q07011 255 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 HES1Q14469 280 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 RFX4Q33E94 735 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 SLC36A3Q495N2 470 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 GLYATL3Q5SZD4 288 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 CORO6Q6QEF8 472 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 DRAM2Q6UX65 266 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 Q75L30 129 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 CCDC190Q86UF4 302 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 ZNF491Q8N8L2 437 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 OR6T1Q8NGN1 323 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 OR2AE1Q8NHA4 323 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 PFN4Q8NHR9 129 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 TMEM239Q8WW34 195 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 RPL3LQ92901 407 aaKnown RBP4.38□□□□□ -1.71
ATXN3-223ENST00000553686 TMEM106AQ96A25 262 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 FLYWCH2Q96CP2 140 aaKnown RBP4.38□□□□□ -1.71
ATXN3-223ENST00000553686 OR5B12Q96R08 314 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 NRIP2Q9BQI9 281 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 PAPOLGQ9BWT3 736 aaKnown RBP4.38□□□□□ -1.71
ATXN3-223ENST00000553686 BARHL1Q9BZE3 327 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 NDEL1Q9GZM8 345 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 SP140LQ9H930 580 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 PLEKHA1Q9HB21 404 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 MRPS28Q9Y2Q9 187 aaKnown RBP4.38□□□□□ -1.71
ATXN3-223ENST00000553686 MED31Q9Y3C7 131 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 MPC1Q9Y5U8 109 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 LHFPL6Q9Y693 200 aa4.38□□□□□ -1.71
ATXN3-223ENST00000553686 A0A0J9YWU9 116 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 A0A1W2PPI3 338 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 hADV38S2A0JD32 116 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 C16orf90A8MZG2 172 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 COPEO14579 308 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 TOR1AO14656 332 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 CRABP1P29762 137 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 SLC9A3P48764 834 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 PRRX1P54821 245 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 NME5P56597 212 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 EDDM3BP56851 147 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 GNB1P62873 340 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 ZNF45Q02386 682 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 SMIM21Q3B7S5 101 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 SNAI3Q3KNW1 292 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 ZNF876PQ49A33 203 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 SOHLH1Q5JUK2 328 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 GCNT6Q5T4J0 391 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 TPTE2P1Q5T6R2 138 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 OTPQ5XKR4 325 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 LCN12Q6JVE5 192 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 DNM1P34Q6PK57 102 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 GLDNQ6ZMI3 551 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-223ENST00000553686 CCDC80Q76M96 950 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 GDPD3Q7L5L3 318 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 OAFQ86UD1 273 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 CATSPERDQ86XM0 798 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 OR6V1Q8N148 313 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 GVQW1Q8N7I0 195 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 SPATA4Q8NEY3 305 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 OR52L1Q8NGH7 329 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 OR4C15Q8NGM1 316 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 MYOZ3Q8TDC0 251 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 LGALS12Q96DT0 336 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 RNF170Q96K19 258 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 LITAFQ99732 161 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 PRSS27Q9BQR3 290 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 ABCG5Q9H222 651 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 ZDHHC18Q9NUE0 388 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 PSMC3IPQ9P2W1 217 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-223ENST00000553686 FAT2Q9NYQ8 4349 aa4.37□□□□□ -1.71
ATXN3-223ENST00000553686 NCBP2LA6PVI3 153 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms