RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 RSBN1Q5VWQ0 802 aaPredicted RBP11.16□□□□□ -0.62
ERBB3-215ENST00000550828 NLRC3Q7RTR2 1065 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 IZUMO1Q8IYV9 350 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 DCTN5Q9BTE1 182 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 FAAP24Q9BTP7 215 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 SSBP3Q9BWW4 388 aaPredicted RBP11.16□□□□□ -0.62
ERBB3-215ENST00000550828 PECRQ9BY49 303 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 FAM234AQ9H0X4 552 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 CLN8Q9UBY8 286 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 GLS2Q9UI32 602 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 PEX16Q9Y5Y5 336 aa11.16□□□□□ -0.62
ERBB3-215ENST00000550828 UBE2QL1A1L167 161 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 CSN2P05814 226 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 NDUFB7P17568 137 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 CDK2P24941 298 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 GLIPR1P48060 266 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 GNB2P62879 340 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 AESQ08117 197 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 MADCAM1Q13477 382 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 ESCO2Q56NI9 601 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 LRRC10Q5BKY1 277 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 BTN2A1Q7KYR7 527 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 OR4M1Q8NGD0 313 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 OR56B1Q8NGI3 324 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 OR10R2Q8NGX6 335 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 MCFD2Q8NI22 146 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 AP3S1Q92572 193 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 MSI2Q96DH6 328 aaKnown RBP11.15□□□□□ -0.62
ERBB3-215ENST00000550828 HDHD3Q9BSH5 251 aaPredicted RBP11.15□□□□□ -0.62
ERBB3-215ENST00000550828 ZMAT3Q9HA38 289 aaKnown RBP11.15□□□□□ -0.62
ERBB3-215ENST00000550828 MMP26Q9NRE1 261 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 ING3Q9NXR8 418 aa11.15□□□□□ -0.62
ERBB3-215ENST00000550828 POLR3KQ9Y2Y1 108 aaPredicted RBP11.15□□□□□ -0.62
ERBB3-215ENST00000550828 TRAV39A0A0B4J263 110 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 MGST3O14880 152 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 APOA1P02647 267 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 PTHLHP12272 177 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 HIST1H1DP16402 221 aaKnown RBP11.14□□□□□ -0.63
ERBB3-215ENST00000550828 GNB3P16520 340 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 RANBP1P43487 201 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 P2RX3P56373 397 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 PAX5Q02548 391 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 GAPTQ8N292 157 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 LY6G5BQ8NDX9 201 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 H1FXQ92522 213 aaKnown RBP11.14□□□□□ -0.63
ERBB3-215ENST00000550828 RAB3CQ96E17 227 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 GSX1Q9H4S2 264 aaPredicted RBP11.14□□□□□ -0.63
ERBB3-215ENST00000550828 SPACA1Q9HBV2 294 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 AK3Q9UIJ7 227 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 KIF25Q9UIL4 384 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 RPUSD1Q9UJJ7 312 aaKnown RBP11.14□□□□□ -0.63
ERBB3-215ENST00000550828 HSF4Q9ULV5 492 aa11.14□□□□□ -0.63
ERBB3-215ENST00000550828 LOC105371242A0A075B767 164 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 METTL21EPA6NDL7 271 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 FOXH1O75593 365 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 MSMBP08118 114 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 ZNF16P17020 682 aaPredicted RBP11.13□□□□□ -0.63
ERBB3-215ENST00000550828 NPY4RP50391 375 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 ZNF273Q14593 569 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 MZT2AQ6P582 158 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 ZNF497Q6ZNH5 498 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 C5orf24Q7Z6I8 188 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 RAB40AQ8WXH6 277 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 NEDD4LQ96PU5 975 aa11.13□□□□□ -0.63
ERBB3-215ENST00000550828 C6orf62Q9GZU0 229 aaPredicted RBP11.13□□□□□ -0.63
ERBB3-215ENST00000550828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.13□□□□□ -0.63
ERBB3-215ENST00000550828 SONP18583 2426 aaKnown RBP11.13□□□□□ -0.63
ERBB3-215ENST00000550828 TRAV18A0A075B6X5 111 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 IGHV2-70DA0A0C4DH43 119 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 ODAMA1E959 279 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 TMEM235A6NFC5 223 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 MCRIP1C9JLW8 97 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 XRCC3O43542 346 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 SSX5O60225 188 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 NAPSAO96009 420 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 MT-ND4P03905 459 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 GLAP06280 429 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 ERP29P30040 261 aaKnown RBP11.12□□□□□ -0.63
ERBB3-215ENST00000550828 DLX6P56179 175 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 EDDM3BP56851 147 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 TAS2R20P59543 309 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 KRBOX4Q5JUW0 171 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 TMEM200BQ69YZ2 307 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 SLC35E4Q6ICL7 350 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 Q6ZTK2 550 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 GDPD3Q7L5L3 318 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 LINC01356Q8N9X3 169 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 OR5D13Q8NGL4 314 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 OR13A1Q8NGR1 328 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 MRPL30Q8TCC3 161 aaKnown RBP11.12□□□□□ -0.63
ERBB3-215ENST00000550828 NEK7Q8TDX7 302 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 GCDHQ92947 438 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-215ENST00000550828 CMTM3Q96MX0 182 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 SMR3AQ99954 134 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 NUDT16L1Q9BRJ7 211 aaKnown RBP11.12□□□□□ -0.63
ERBB3-215ENST00000550828 PLEKHJ1Q9NW61 149 aa11.12□□□□□ -0.63
ERBB3-215ENST00000550828 ETAA1Q9NY74 926 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms