RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 TCRBV4S1A1TA0A5B7 111 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 OR2AT4A6NND4 320 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 ANKRD30BLA7E2S9 258 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 H0YAE9 185 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 SPINT2O43291 252 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 AKR7A2O43488 359 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 XRCC2O43543 280 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 IDH3BO43837 385 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 RAMP3O60896 148 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 GLCEO94923 617 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 BAG2O95816 211 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CST4P01036 141 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 NPPAP01160 153 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 IFNW1P05000 195 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 ALDOBP05062 364 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 SLC2A1P11166 492 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 HIST1H1CP16403 213 aaKnown RBP2.78□□□□□ -1.96
LIMA1-206ENST00000550611 S100A1P23297 94 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 IFNA8P32881 189 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 MYCNOSP40205 109 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 VDAC2P45880 294 aaPredicted RBP2.78□□□□□ -1.96
LIMA1-206ENST00000550611 AMTP48728 403 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 PRKXP51817 358 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CTAG1AP78358 180 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 IL5RAQ01344 420 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CYLC2Q14093 348 aaPredicted RBP2.78□□□□□ -1.96
LIMA1-206ENST00000550611 DGCR6Q14129 220 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 TEX30Q5JUR7 227 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 PAPPA-AS1Q5QFB9 102 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 AGBL2Q5U5Z8 902 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 ZNF770Q6IQ21 691 aaPredicted RBP2.78□□□□□ -1.96
LIMA1-206ENST00000550611 DNM1P34Q6PK57 102 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 SMARCD3Q6STE5 483 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 C10orf99Q6UWK7 81 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 ZNF730Q6ZMV8 503 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 SLC16A9Q7RTY1 509 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 VTCN1Q7Z7D3 282 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CENPVQ7Z7K6 275 aaPredicted RBP2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CROCCP2Q86T23 111 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 ZDHHC21Q8IVQ6 265 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CD177Q8N6Q3 437 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CSNK2A3Q8NEV1 391 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 OR2AJ1Q8NGZ0 328 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 OR8S1Q8NH09 359 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 RPS4Y2Q8TD47 263 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 OR5P3Q8WZ94 311 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 RPL3LQ92901 407 aaKnown RBP2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CDRT15Q96T59 188 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 P2RX4Q99571 388 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 MCRIP2Q9BUT9 160 aaKnown RBP2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CHID1Q9BWS9 393 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 SP140LQ9H930 580 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 C19orf12Q9NSK7 152 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 FKBP14Q9NWM8 211 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 VNN3Q9NY84 501 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 CD300AQ9UGN4 299 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 PITPNC1Q9UKF7 332 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 POLR1DQ9Y2S0 133 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 TBL2Q9Y4P3 447 aaKnown RBP2.78□□□□□ -1.96
LIMA1-206ENST00000550611 MPC1Q9Y5U8 109 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 FAT2Q9NYQ8 4349 aa2.78□□□□□ -1.96
LIMA1-206ENST00000550611 DNAH17Q9UFH2 4485 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 SRRM2Q9UQ35 2752 aaKnown RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 TRBV4-1A0A0J9YWV2 114 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 TMEM210A6NLX4 147 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 FAM220BPB1ANY3 271 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 ANGPT2O15123 496 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 SULT1B1O43704 296 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 NOS1APO75052 506 aaPredicted RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF254O75437 659 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 RENP00797 406 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 IGLV2-11P01706 119 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 RBP4P02753 201 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF823P16415 610 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 CCL3L1P16619 93 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 PAICSP22234 425 aaKnown RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 COX7A1P24310 79 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 ACKR3P25106 362 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 AZGP1P25311 298 aaKnown RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 PRDX2P32119 198 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 RPS27P42677 84 aaKnown RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 CEBPDP49716 269 aaPredicted RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 MAGOHP61326 146 aaKnown RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 RPL31P62899 125 aaKnown RBP2.77□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF273Q14593 569 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 SSX2Q16385 188 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 COQ5Q5HYK3 327 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 MINOS1Q5TGZ0 78 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 METTL21CQ5VZV1 264 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 LCN8Q6JVE9 175 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 UNQ9370/PRO34162Q6UXP9 181 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 DCXRQ7Z4W1 244 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 FOXRED2Q8IWF2 684 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 LINC00469Q8N7U9 141 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 OR2AK2Q8NG84 335 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 OR52H1Q8NGJ2 320 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 OR4K13Q8NH42 304 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 TMED6Q8WW62 240 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 HPSE2Q8WWQ2 592 aa2.77□□□□□ -1.97
LIMA1-206ENST00000550611 AQP3Q92482 292 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms