RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 OR10G9Q8NGN4 311 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 OR10G7Q8NGN6 311 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 PLSCR3Q9NRY6 295 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 CST2P09228 141 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 GALNSP34059 522 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 CLLU1Q5K131 121 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 COL13A1Q5TAT6 717 aaPredicted RBP11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 HMGCLL1Q8TB92 370 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 SLC7A10Q9NS82 523 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 WASHC3Q9Y3C0 194 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 SIPA1L1O43166 1804 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 TNXAQ16473 311 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 DIRC2Q96SL1 478 aa11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 ZNF71Q9NQZ8 489 aaPredicted RBP11.06□□□□□ -0.64
RAB3IP-212ENST00000550536 HAND1O96004 215 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 GGNBP1Q5YKI7 109 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 ZNF547Q8IVP9 402 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 HMSDA8MTL9 139 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 LSM6P62312 80 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 OR2Y1Q8NGV0 311 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 TCFL5Q9UL49 500 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 SOX15O60248 233 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 HLA-GP17693 338 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 FAM109BQ6ICB4 259 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 SIRT3Q9NTG7 399 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 BMPR1BO00238 502 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 PERPQ96FX8 193 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 GSX1Q9H4S2 264 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 TMEM167BQ9NRX6 74 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 WDR90Q96KV7 1748 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 SPINK4O60575 86 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 BCL3P20749 454 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 FOXO1Q12778 655 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 PIK3IP1Q96FE7 263 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 GABRG3Q99928 467 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 NQO2P16083 231 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 RPL30P62888 115 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 RPS4Y2Q8TD47 263 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 TMEM37Q8WXS4 190 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 ZNF385DQ9H6B1 395 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 SPTAN1Q13813 2472 aaKnown RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 DUXBA0A1W2PPF3 345 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 ELOBQ15370 118 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 DHRS11Q6UWP2 260 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 KCNK15Q9H427 330 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 GPR27Q9NS67 375 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 CACNA1EQ15878 2313 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 HOXB3P14651 431 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 HLXQ14774 488 aaPredicted RBP11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 ZG16BQ96DA0 208 aa11.05□□□□□ -0.64
RAB3IP-212ENST00000550536 OPN1MWP04001 364 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 OPN1MW2P0DN77 364 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 OPN1MW3P0DN78 364 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 PRR7Q8TB68 274 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 SF3B5Q9BWJ5 86 aaKnown RBP11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 LPAR3Q9UBY5 353 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 RBFOX3A6NFN3 312 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 KCNMB2Q9Y691 235 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 TGIF2LYQ8IUE0 185 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 R3HDM4Q96D70 268 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 C1RLQ9NZP8 487 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 C11orf94C9JXX5 98 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 PHOX2AO14813 284 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 IGHV3-13P01766 116 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 IGHV3-7P01780 117 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 TECRQ9NZ01 308 aaKnown RBP11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 HOXA4Q00056 320 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 NKG7Q16617 165 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 CELA2BP08218 269 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 PNRC1Q12796 327 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 ZNF770Q6IQ21 691 aaPredicted RBP11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 FAM210BQ96KR6 192 aa11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 ZMAT5Q9UDW3 170 aaKnown RBP11.04□□□□□ -0.64
RAB3IP-212ENST00000550536 IGSF23A1L1A6 192 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 FAM157AC9JC47 383 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 NXPH1P58417 271 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 IL24Q13007 206 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 CLPPQ16740 277 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 B3GNTL1Q67FW5 361 aaPredicted RBP11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 AMER3Q8N944 861 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 PTP4A1Q93096 173 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 MARVELD1Q9BSK0 173 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 TNFRSF19Q9NS68 423 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 GNG7O60262 68 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 OR3A1P47881 315 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 RAB32Q13637 225 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 MS4A10Q96PG2 267 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 RASL10BQ96S79 203 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 MRPL37Q9BZE1 423 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 LIPT2A6NK58 231 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 PDE6DO43924 150 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 MRM1Q6IN84 353 aaKnown RBP11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 PRSS42Q7Z5A4 293 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 C17orf47Q8NEP4 570 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 AP5S1Q9NUS5 200 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 R4GN57 208 aa11.03□□□□□ -0.64
RAB3IP-212ENST00000550536 M0R2Z0 102 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms