RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 FBP1P09467 338 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 SLC2A2P11168 524 aaPredicted RBP10.99□□□□□ -0.65
NUP188-211ENST00000550219 NDUFB7P17568 137 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 AMY2BP19961 511 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 IER3P46695 156 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 NPBWR2P48146 333 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 RORCP51449 518 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 CAPZA1P52907 286 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 KRTAP10-3P60369 221 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 DYNC1I2Q13409 638 aaKnown RBP10.99□□□□□ -0.65
NUP188-211ENST00000550219 PDLIM3Q53GG5 364 aaPredicted RBP10.99□□□□□ -0.65
NUP188-211ENST00000550219 HES5Q5TA89 166 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 AWAT2Q6E213 333 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 DHRS7BQ6IAN0 325 aaPredicted RBP10.99□□□□□ -0.65
NUP188-211ENST00000550219 Q8IYB0 196 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 PNKDQ8N490 385 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 LY6G5BQ8NDX9 201 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 SLAMF9Q96A28 289 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 FAM3DQ96BQ1 224 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 KCTD12Q96CX2 325 aaKnown RBP10.99□□□□□ -0.65
NUP188-211ENST00000550219 CEP19Q96LK0 163 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 CITED1Q99966 193 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 DCTN5Q9BTE1 182 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 METTL9Q9H1A3 318 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 DPAGT1Q9H3H5 408 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 ELL3Q9HB65 397 aaPredicted RBP10.99□□□□□ -0.65
NUP188-211ENST00000550219 RASL12Q9NYN1 266 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 CCDC59Q9P031 241 aaKnown RBP10.99□□□□□ -0.65
NUP188-211ENST00000550219 DAPK2Q9UIK4 370 aa10.99□□□□□ -0.65
NUP188-211ENST00000550219 TMEM14DPA8MWL7 114 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 RNASEK-C17orf49H0YIS7 233 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 TIMM23O14925 209 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 NPFFO15130 113 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 ZNF780AO75290 641 aaPredicted RBP10.98□□□□□ -0.65
NUP188-211ENST00000550219 PAHP00439 452 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 VSIG8P0DPA2 414 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 CALCBP10092 127 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 ARSBP15848 533 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 ZNF182P17025 639 aaPredicted RBP10.98□□□□□ -0.65
NUP188-211ENST00000550219 BCL3P20749 454 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 GABRA2P47869 451 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 BMXP51813 675 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 CLDN12P56749 244 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 SCAND1P57086 179 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 RPL15P61313 204 aaKnown RBP10.98□□□□□ -0.65
NUP188-211ENST00000550219 GUCA2AQ02747 115 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 GPR176Q14439 515 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 P2RY14Q15391 338 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 TAF9Q16594 264 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 DGUOKQ16854 277 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 C11orf91Q3C1V1 193 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 C2orf76Q3KRA6 126 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 IDNKQ5T6J7 187 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 OR51D1Q8NGF3 324 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 LINC01006Q8NI28 216 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 MRPS24Q96EL2 167 aaKnown RBP10.98□□□□□ -0.65
NUP188-211ENST00000550219 ZNF488Q96MN9 340 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 GAFA1Q96PS6 74 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 LIN7BQ9HAP6 207 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 SEBOXQ9HB31 216 aaPredicted RBP10.98□□□□□ -0.65
NUP188-211ENST00000550219 HMG20AQ9NP66 347 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 PCDHB16Q9NRJ7 776 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 ABRACLQ9P1F3 81 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 ZNRD1Q9P1U0 126 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 SLC25A10Q9UBX3 287 aaPredicted RBP10.98□□□□□ -0.65
NUP188-211ENST00000550219 ING4Q9UNL4 249 aa10.98□□□□□ -0.65
NUP188-211ENST00000550219 A0A0B4J203 849 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 GPR37O15354 613 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 GLRA1P23415 457 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 SAA4P35542 130 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 RSU1Q15404 277 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 SLC22A6Q4U2R8 563 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 NHLRC3Q5JS37 347 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 ACP7Q6ZNF0 438 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 Q6ZSV7 163 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 OR2W3Q7Z3T1 314 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 FAM58AQ8N1B3 248 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 Q8N7P7 452 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 TMEM185AQ8NFB2 350 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 OR51T1Q8NGJ9 327 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 OR10K1Q8NGX5 313 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 KCNG3Q8TAE7 436 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 PTX4Q96A99 478 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 S100A13Q99584 98 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 SLIRPQ9GZT3 109 aaKnown RBP10.97□□□□□ -0.65
NUP188-211ENST00000550219 RBFOX1Q9NWB1 397 aaKnown RBP10.97□□□□□ -0.65
NUP188-211ENST00000550219 NLKQ9UBE8 527 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 VPREB3Q9UKI3 123 aa10.97□□□□□ -0.65
NUP188-211ENST00000550219 TMEM272A0A1B0GTI8 110 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 A0A1W2PP11 408 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 MEIOCA2RUB1 952 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 OR2AT4A6NND4 320 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 NXPH2O95156 264 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 TSPAN15O95858 294 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 GTF2F2P13984 249 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 SNRPBP14678 240 aaKnown RBP10.96□□□□□ -0.65
NUP188-211ENST00000550219 RAB6AP20340 208 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 SOX6P35712 828 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 UNC119Q13432 240 aa10.96□□□□□ -0.65
NUP188-211ENST00000550219 METAP1DQ6UB28 335 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms