RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TMEM11P17152 192 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 CALB2P22676 271 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 POU3F4P49335 361 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 ISL1P61371 349 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 SCN1BQ07699 218 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 MADCAM1Q13477 382 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 RBM39Q14498 530 aaKnown RBP7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 PNLIPRP3Q17RR3 467 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 TMEM244Q5VVB8 128 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 C12orf73Q69YU5 71 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 SLC35E3Q7Z769 313 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 FOXRED2Q8IWF2 684 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 RDH10Q8IZV5 341 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 STPG2Q8N412 459 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 DRAM1Q8N682 238 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 OR51T1Q8NGJ9 327 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 OR5M8Q8NGP6 311 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 OR56B4Q8NH76 319 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 HAVCR2Q8TDQ0 301 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 TOMM40LQ969M1 308 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 FGGYQ96C11 551 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 HRASLS5Q96KN8 279 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 GON7Q9BXV9 100 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 KRT84Q9NSB2 600 aa7.74□□□□□ -1.17
TRAFD1-207ENST00000550051 LOC107986453A0A1B0GWG9 222 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 LINC01548A6NM66 108 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 NPIPB11E5RHQ5 1161 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 AP4M1O00189 453 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 ATP8B1O43520 1251 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 FKBP6O75344 327 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 ZNF44P15621 663 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 NFYBP25208 207 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 EPHA2P29317 976 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 C21orf33P30042 268 aaPredicted RBP7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 HTR1FP30939 366 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 KIR3DL2P43630 455 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 SNU13P55769 128 aaKnown RBP7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 PAX5Q02548 391 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 FOXE3Q13461 319 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 HES1Q14469 280 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 CDK5R1Q15078 307 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 FDX2Q6P4F2 183 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 KCTD20Q7Z5Y7 419 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 TGIF2LXQ8IUE1 241 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 OR10A7Q8NGE5 316 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 OR8U1Q8NH10 309 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 MUC7Q8TAX7 377 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 UTP4Q969X6 686 aaKnown RBP7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 CCDC124Q96CT7 223 aaKnown RBP7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 OPALINQ96PE5 141 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 DUX3Q96PT4 197 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 IL4I1Q96RQ9 567 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 MBOAT4Q96T53 435 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 TBX5Q99593 518 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 THTPAQ9BU02 230 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 OSBPL10Q9BXB5 764 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 ABCG5Q9H222 651 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 LINC00527Q9UJ94 153 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 PSG11Q9UQ72 335 aa7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 SIRT4Q9Y6E7 314 aaPredicted RBP7.73□□□□□ -1.17
TRAFD1-207ENST00000550051 TCRBV3S1A0A5B6 114 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 M0R129 80 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 CCRL2O00421 344 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 IGKV1D-33P01593 117 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 IGKV1-33P01594 117 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 ELANEP08246 267 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 ECI1P42126 302 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 LUMP51884 338 aaPredicted RBP7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 TMED1Q13445 227 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 DIAPH2-AS1Q14236 149 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 HNF4GQ14541 408 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 LCNL1Q6ZST4 164 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 Q8N6K4 173 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 OR2G2Q8NGZ5 317 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 EAF1Q96JC9 268 aaPredicted RBP7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 PRR25Q96S07 402 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 ASCL2Q99929 193 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 BARHL1Q9BZE3 327 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 PPIL3Q9H2H8 161 aaKnown RBP7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 LIN7CQ9NUP9 197 aaKnown RBP7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 CALYQ9NYX4 217 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 IDI2-AS1Q9NZ38 188 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 FRRS1LQ9P0K9 344 aa7.72□□□□□ -1.17
TRAFD1-207ENST00000550051 STAB2Q8WWQ8 2551 aa7.71□□□□□ -1.17
TRAFD1-207ENST00000550051 TENM2Q9NT68 2774 aa7.71□□□□□ -1.17
TRAFD1-207ENST00000550051 SORL1Q92673 2214 aa7.71□□□□□ -1.17
TRAFD1-207ENST00000550051 SEC14L6B5MCN3 397 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 MPZL2O60487 215 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 MITFO75030 526 aaPredicted RBP7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 IL1AP01583 271 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 IGHG4P01861 327 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 GAPDHP04406 335 aaKnown RBP7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 DBTP11182 482 aaKnown RBP7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 ZNF20P17024 532 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 GPR12P47775 334 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 MTNR1BP49286 362 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 INSL3P51460 131 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 CCR9P51686 369 aa7.71□□□□□ -1.18
TRAFD1-207ENST00000550051 RAB25P57735 213 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms