RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ZDHHC13Q8IUH4 622 aa12.17□□□□□ -0.46
RAB5C-205ENST00000550013 CHST4Q8NCG5 386 aa12.17□□□□□ -0.46
RAB5C-205ENST00000550013 OR13A1Q8NGR1 328 aa12.17□□□□□ -0.46
RAB5C-205ENST00000550013 CHPT1Q8WUD6 406 aa12.17□□□□□ -0.46
RAB5C-205ENST00000550013 P2RX4Q99571 388 aa12.17□□□□□ -0.46
RAB5C-205ENST00000550013 MCRIP2Q9BUT9 160 aaKnown RBP12.17□□□□□ -0.46
RAB5C-205ENST00000550013 RIBC2Q9H4K1 309 aa12.17□□□□□ -0.46
RAB5C-205ENST00000550013 OR6C3Q9NZP0 311 aa12.17□□□□□ -0.46
RAB5C-205ENST00000550013 STAB2Q8WWQ8 2551 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 SERPINE3A8MV23 424 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 H0YHG0 523 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 J3QR06 171 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 MT-ND2P03891 347 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 TMEM11P17152 192 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 MYCNOSP40205 109 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 BNIP1Q12981 228 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 LTC4SQ16873 150 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 FDX2Q6P4F2 183 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 SAXO1Q8IYX7 474 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 OR8J1Q8NGP2 316 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 OR13C3Q8NGS6 347 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 TFAP2CQ92754 450 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 HRASLS5Q96KN8 279 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 PCDHB16Q9NRJ7 776 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 CALYQ9NYX4 217 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 ENOPH1Q9UHY7 261 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 KIF25Q9UIL4 384 aa12.16□□□□□ -0.46
RAB5C-205ENST00000550013 AMMECR1Q9Y4X0 333 aaPredicted RBP12.16□□□□□ -0.46
RAB5C-205ENST00000550013 TMEM225BP0DP42 221 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 ZP1P60852 638 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 DGCR2P98153 550 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 TMED1Q13445 227 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 OR51T1Q8NGJ9 327 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 RFKQ969G6 155 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 GABARAPL3Q9BY60 117 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 ZFP57Q9NU63 452 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 IDI2-AS1Q9NZ38 188 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 PSG11Q9UQ72 335 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 MYRFQ9Y2G1 1151 aa12.15□□□□□ -0.46
RAB5C-205ENST00000550013 MEIKINA0A087WXM9 373 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 LINC01548A6NM66 108 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 OR4C45A6NMZ5 311 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 H0YJX3 145 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 SLC16A6O15403 523 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 FGF16O43320 207 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 IGKV1D-33P01593 117 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 IGKV1-33P01594 117 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 HTR1AP08908 422 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 FASP25445 335 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 GNG10P50151 68 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 RAB25P57735 213 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 MADCAM1Q13477 382 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 DCTN2Q13561 401 aaKnown RBP12.14□□□□□ -0.47
RAB5C-205ENST00000550013 PAN3Q58A45 887 aaKnown RBP12.14□□□□□ -0.47
RAB5C-205ENST00000550013 UNQ9370/PRO34162Q6UXP9 181 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 SLC35E3Q7Z769 313 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 ZNF695Q8IW36 515 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 RFESDQ8TAC1 157 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 RAX2Q96IS3 184 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 NR1H4Q96RI1 486 aaPredicted RBP12.14□□□□□ -0.47
RAB5C-205ENST00000550013 OSBPL10Q9BXB5 764 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 ZCCHC4Q9H5U6 513 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 RHOFQ9HBH0 211 aa12.14□□□□□ -0.47
RAB5C-205ENST00000550013 TRAV39A0A0B4J263 110 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 A0A1W2PPE3 182 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 DAPL1A0PJW8 107 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 J3QLW9 94 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 J3QRE1 110 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 IL1AP01583 271 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 IGHG2P01859 326 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 HCKP08631 526 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 ZNF19P17023 458 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 SLC6A1P30531 599 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 CCR9P51686 369 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 LUMP51884 338 aaPredicted RBP12.13□□□□□ -0.47
RAB5C-205ENST00000550013 SLC35B1P78383 322 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 KISS1Q15726 138 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 LPCAT4Q643R3 524 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 KCTD20Q7Z5Y7 419 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 OR8H3Q8N146 312 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 STPG2Q8N412 459 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 PLPPR1Q8TBJ4 325 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 MRGPRDQ8TDS7 321 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 RNFT2Q96EX2 444 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 PELI1Q96FA3 418 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 LINC00574Q9H8X3 128 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 AP4S1Q9Y587 144 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 U3KQK5 164 aa12.13□□□□□ -0.47
RAB5C-205ENST00000550013 CCL24O00175 119 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 SSTR5P35346 364 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 MTNR1BP49286 362 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 RAB7AP51149 207 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 ALKBH1Q13686 389 aaKnown RBP12.12□□□□□ -0.47
RAB5C-205ENST00000550013 ZSCAN26Q16670 478 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 DEFB136Q30KP8 78 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 ZNF691Q5VV52 312 aa12.12□□□□□ -0.47
RAB5C-205ENST00000550013 RSBN1Q5VWQ0 802 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-205ENST00000550013 COMMD1Q8N668 190 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms