RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 CGB7P0DN87 165 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 CEACAM3P40198 252 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 KCNJ3P48549 501 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 PPP3R1P63098 170 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 ATXN7L3Q14CW9 347 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 RCN1Q15293 331 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 PAN3Q58A45 887 aaKnown RBP14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 DMKNQ6E0U4 476 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 BAIAP2L2Q6UXY1 529 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 ZNF485Q8NCK3 441 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 GHSRQ92847 366 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 PPIL3Q9H2H8 161 aaKnown RBP14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 IL36GQ9NZH8 169 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 CLEC2DQ9UHP7 191 aa14.99□□□□□ -0.01
CHMP1A-207ENST00000549328 TRBV5-5A0A0J9YX44 114 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 TOR1AO14656 332 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 GPX5O75715 221 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 LALBAP00709 142 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 VSIG10L2P0DP72 767 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 JUNBP17275 347 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 BDKRB2P30411 391 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 BRS3P32247 399 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 ZNF93P35789 620 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 GDNFP39905 211 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 ARHGDIBP52566 201 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 PRRX1P54821 245 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 ST3GAL4Q11206 333 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 C17orf58Q2M2W7 97 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 NHLRC3Q5JS37 347 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 C16orf82Q7Z2V1 217 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 GGHQ92820 318 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 FAM192AQ9GZU8 254 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 IFT22Q9H7X7 185 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 LINC00574Q9H8X3 128 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 ZNF286AQ9HBT8 521 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 PAK1IP1Q9NWT1 392 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 ING3Q9NXR8 418 aa14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 CNOT2Q9NZN8 540 aaKnown RBP14.98□□□□□ -0.01
CHMP1A-207ENST00000549328 EFCAB10A6NFE3 127 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 HTR3BO95264 441 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 C21orf33P30042 268 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 CAPGP40121 348 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 OR3A4PP47883 348 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 HLA-DRB5Q30154 266 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 Q499Y3 187 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 YIF1BQ5BJH7 314 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 DDI2Q5TDH0 399 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 OR10K1Q8NGX5 313 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 FAM110DQ8TAY7 271 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 METTL9Q9H1A3 318 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 PCDHB16Q9NRJ7 776 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 KIF25Q9UIL4 384 aa14.97□□□□□ -0.01
CHMP1A-207ENST00000549328 MEIKINA0A087WXM9 373 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 OOSP1A8MZH6 123 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 BUB1B-PAK6H3BSN5 160 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 HSPB6O14558 160 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 CASQ2O14958 399 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 ZNF780AO75290 641 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 CDRT1O95170 752 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 CSTBP04080 98 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 IGFBP3P17936 291 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 TAS2R43P59537 309 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 BLCAPP62952 87 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 RIPK1Q13546 671 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 HABP2Q14520 560 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 PIGYQ3MUY2 71 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 PDLIM3Q53GG5 364 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 OGFRL1Q5TC84 451 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 RSBN1Q5VWQ0 802 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 C8orf59Q8N0T1 100 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 OSR2Q8N2R0 312 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 KIRREL1Q96J84 757 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 AKR1E2Q96JD6 320 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 S100A13Q99584 98 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 WNT10AQ9GZT5 417 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 LIN7BQ9HAP6 207 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 PLCXD1Q9NUJ7 323 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 CKLFQ9UBR5 152 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 ING4Q9UNL4 249 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 ST3GAL6Q9Y274 331 aa14.96□□□□□ -0.01
CHMP1A-207ENST00000549328 FAM172BPA6NC97 362 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 LY6LH3BQJ8 138 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 GNAO1P09471 354 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 GLP1RP43220 463 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 RBM11P57052 281 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 RPS11P62280 158 aaKnown RBP eCLIP14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 CCDC144NLQ6NUI1 221 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 LINC00596Q86U02 117 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 C11orf44Q8N8P7 122 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 OR10A7Q8NGE5 316 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 OR13A1Q8NGR1 328 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 OR13C5Q8NGS8 318 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 OR9G1Q8NH87 305 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 WIPF2Q8TF74 440 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 FBLIM1Q8WUP2 373 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 PGLYRP3Q96LB9 341 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 ZNF184Q99676 751 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 CALYQ9NYX4 217 aa14.95□□□□□ -0.02
CHMP1A-207ENST00000549328 PSORS1C1Q9UIG5 152 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms