RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ZNF100Q8IYN0 542 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 FOXB1Q99853 325 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 PLEKHF2Q9H8W4 249 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 LYRM2Q9NU23 88 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 HS3ST3B1Q9Y662 390 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 FREM1Q5H8C1 2179 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 LOC102723996A0A087X1L8 192 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 A0A1B0GW64 132 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 BCL3P20749 454 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 EPHA8P29322 1005 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 STARD6P59095 220 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 RAC3P60763 192 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 COL19A1Q14993 1142 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 TSC22D1Q15714 1073 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 Q8WTZ3 238 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 IL36GQ9NZH8 169 aa12.16□□□□□ -0.46
RAPGEF3-218ENST00000548919 ZNF716A6NP11 495 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 SRP19P09132 144 aaKnown RBP12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 RFPL3SP0C7P2 107 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 CCL2P13500 99 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 CCNOP22674 350 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 NDUFA6P56556 154 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 B3GALT5-AS1P59052 145 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 UBE2KP61086 200 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 DLK1P80370 383 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 HERPUD1Q15011 391 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 RPS19BP1Q86WX3 136 aaKnown RBP12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 GGACTQ9BVM4 153 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 TINAGQ9UJW2 476 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 ZNF816-ZNF321PA0A0X1KG74 233 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 H3BP45 60 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 CHST1O43916 411 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 CBR3O75828 277 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 KLF7O75840 302 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 S100PP25815 95 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 ICAM4Q14773 271 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 EXT1Q16394 746 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 KRTAP27-1Q3LI81 207 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 C9orf135Q5VTT2 229 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 CDPF1Q6NVV7 123 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 GGNQ86UU5 652 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 CPEB3Q8NE35 698 aaKnown RBP12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 CPT1CQ8TCG5 803 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 TMEM56Q96MV1 263 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 TMPRSS5Q9H3S3 457 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 SH2D2AQ9NP31 389 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 TMEM56-RWDD3S4R434 201 aa12.15□□□□□ -0.46
RAPGEF3-218ENST00000548919 F10P00742 488 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 ERVFRD-1P60508 538 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 OR8B8Q15620 311 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF674Q2M3X9 581 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 ABHD3Q8WU67 409 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 SIGLEC12Q96PQ1 595 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 CCL28Q9NRJ3 127 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 PARPBPQ9NWS1 579 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 TGIF2-C20orf24A0A0A6YYL0 155 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 RPL36A-HNRNPH2H7BZ11 118 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 CCL4P13236 92 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 MAS1LP35410 378 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 ELOBQ15370 118 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 IZUMO4Q1ZYL8 232 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 C1QL4Q86Z23 238 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 PLPPR1Q8TBJ4 325 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 CPNE4Q96A23 557 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 SF3B5Q9BWJ5 86 aaKnown RBP12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 FGF23Q9GZV9 251 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 TOLLIPQ9H0E2 274 aa12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 MRPS17Q9Y2R5 130 aaKnown RBP12.14□□□□□ -0.47
RAPGEF3-218ENST00000548919 SLC22A20A6NK97 555 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 TRAPPC6AO75865 159 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 SCAF4O95104 1147 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 TK1P04183 234 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 JMJD7P0C870 316 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 GPM6AP51674 278 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 RPS18P62269 152 aaKnown RBP12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 IL22RA1Q8N6P7 574 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 ZNF845Q96IR2 970 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 SLC25A31Q9H0C2 315 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 WDR54Q9H977 334 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 KIAA1456Q9P272 454 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 HSPA12AO43301 675 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 HAAOP46952 286 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 SRPXP78539 464 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 NMSQ5H8A3 153 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 WIPI1Q5MNZ9 446 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 OR10D3Q8NH80 312 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 NEK7Q8TDX7 302 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 GPR35Q9HC97 309 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 Q9N2K0 584 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 DOK5Q9P104 306 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 WSB1Q9Y6I7 421 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 IGKV1-6A0A0C4DH72 117 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 KLK3P07288 261 aaPredicted RBP12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 HOXA5P20719 270 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 CLDN15P56746 228 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
RAPGEF3-218ENST00000548919 LURAP1LQ8IV03 231 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 289.4 ms