RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 ODAMA1E959 279 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 TMEM89A2RUT3 159 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 OR7C1O76099 320 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 PSMA1P25786 263 aaKnown RBP15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 IER3P46695 156 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 C16orf87Q6PH81 154 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 CORO2AQ92828 525 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 AJUBAQ96IF1 538 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 IFT22Q9H7X7 185 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 ZNRD1Q9P1U0 126 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 POMT1Q9Y6A1 747 aa15.25■□□□□ 0.03
PRPF40B-206ENST00000547764 PAHP00439 452 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 IGHV4-59P01825 116 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 FABP5Q01469 135 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 TAF9Q16594 264 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 LINC00596Q86U02 117 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 SUMF2Q8NBJ7 301 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 OR13D1Q8NGV5 346 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 FOXRED1Q96CU9 486 aaPredicted RBP15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 DPCDQ9BVM2 203 aaPredicted RBP15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 CHIAQ9BZP6 476 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 SESN1Q9Y6P5 492 aa15.24■□□□□ 0.03
PRPF40B-206ENST00000547764 MMP23AO75900 390 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 CLPXO76031 633 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 HKR1P10072 659 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 GABRA5P31644 462 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 KCNJ3P48549 501 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 SSX1Q16384 188 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 MPV17LQ2QL34 196 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 GLT8D1Q68CQ7 371 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 SPARTQ8N0X7 666 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 SVOPQ8N4V2 548 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 TMEM104Q8NE00 496 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 PLPPR1Q8TBJ4 325 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 MRPS24Q96EL2 167 aaKnown RBP15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 BARHL1Q9BZE3 327 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 SLITRK2Q9H156 845 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 GAL3ST2Q9H3Q3 398 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 BANF2Q9H503 90 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 TAS2R3Q9NYW6 316 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 KIF25Q9UIL4 384 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 LRRC42Q9Y546 428 aa15.23■□□□□ 0.03
PRPF40B-206ENST00000547764 ARG1P05089 322 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 CD37P11049 281 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 COMPP49747 757 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 LGALS4P56470 323 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 PAX5Q02548 391 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 C1orf100Q5SVJ3 147 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 ATAD3CQ5T2N8 411 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 PRAMEF5Q5TYX0 476 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 RSBN1Q5VWQ0 802 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 BRICD5Q6PL45 260 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 BEND2Q8NDZ0 799 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 OR11H6Q8NGC7 330 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 TAF15Q92804 592 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 DPAGT1Q9H3H5 408 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 NCOR1P1Q9H4R4 102 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 OR6C3Q9NZP0 311 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 GHRLQ9UBU3 117 aa15.22■□□□□ 0.03
PRPF40B-206ENST00000547764 MEIKINA0A087WXM9 373 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 FAM181BA6NEQ2 426 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 ODF3BA8MYP8 253 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 CRTAPO75718 401 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 ARL6IP5O75915 188 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 MGMTP16455 207 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 CDK2P24941 298 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 C17orf58Q2M2W7 97 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 UBE2UQ5VVX9 321 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 ZNF626Q68DY1 528 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 BAIAP2L2Q6UXY1 529 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 HEPN1Q6WQI6 88 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 C12orf54Q6X4T0 127 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 LHFPL4Q7Z7J7 247 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 ZNF565Q8N9K5 539 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 SELENOIQ9C0D9 397 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 MEGF9Q9H1U4 602 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 TMEM133Q9H2Q1 129 aa15.21■□□□□ 0.03
PRPF40B-206ENST00000547764 IGHV2-26A0A0B4J1V2 119 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 FAM90A8PA6NJQ4 464 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 ZNF729A6NN14 1252 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 CGB3P0DN86 165 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 CGB7P0DN87 165 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 OMGP23515 440 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 PAX6P26367 422 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 CALRP27797 417 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 GDNFP39905 211 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 GLP1RP43220 463 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 DYNC1I2Q13409 638 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 OR13A1Q8NGR1 328 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 FAM46BQ96A09 425 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 Q96M66 194 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 GFI1Q99684 422 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 NDUFB11Q9NX14 153 aa15.2■□□□□ 0.02
PRPF40B-206ENST00000547764 KBTBD11-OT1A0A1B0GTJ5 212 aa15.19■□□□□ 0.02
PRPF40B-206ENST00000547764 SLC22A1O15245 554 aa15.19■□□□□ 0.02
PRPF40B-206ENST00000547764 UBBP0CG47 229 aa15.19■□□□□ 0.02
PRPF40B-206ENST00000547764 HTR2CP28335 458 aa15.19■□□□□ 0.02
PRPF40B-206ENST00000547764 FOXL1Q12952 345 aa15.19■□□□□ 0.02
PRPF40B-206ENST00000547764 AWAT1Q58HT5 328 aa15.19■□□□□ 0.02
PRPF40B-206ENST00000547764 LDLRAD2Q5SZI1 272 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms