RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CLINT1Q14677 625 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 ARL6IP1Q15041 203 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 TUSC1Q2TAM9 212 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 LHFPL1Q86WI0 220 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 GAPTQ8N292 157 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 OR52M1Q8NGK5 317 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 RNF122Q9H9V4 155 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 ERRFI1Q9UJM3 462 aaPredicted RBP10.87□□□□□ -0.67
SCAF11-209ENST00000547018 KCNMB2Q9Y691 235 aa10.87□□□□□ -0.67
SCAF11-209ENST00000547018 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 EIF2S3P41091 472 aaKnown RBP10.86□□□□□ -0.67
SCAF11-209ENST00000547018 ALDH3B1P43353 468 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 PPA1Q15181 289 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 OR8G1Q15617 311 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 TFAP2EQ6VUC0 442 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 SNIP1Q8TAD8 396 aaKnown RBP10.86□□□□□ -0.67
SCAF11-209ENST00000547018 BSCL2Q96G97 398 aaPredicted RBP10.86□□□□□ -0.67
SCAF11-209ENST00000547018 C2orf50Q96LR7 162 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 TP53RKQ96S44 253 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 ANKHD1Q8IWZ3 2542 aaKnown RBP10.86□□□□□ -0.67
SCAF11-209ENST00000547018 PQLC2LA1A4F0 135 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 DEFB108AA8MXU0 73 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 PROB1E7EW31 1015 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 CTAG1AP78358 180 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 PSG7Q13046 419 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 KCNRGQ8N5I3 272 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 HSD17B11Q8NBQ5 300 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 OR1S2Q8NGQ3 325 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 GMPPAQ96IJ6 420 aaPredicted RBP10.86□□□□□ -0.67
SCAF11-209ENST00000547018 ZDHHC11Q9H8X9 412 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 PCDHB16Q9NRJ7 776 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 RFNGQ9Y644 331 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 SESN1Q9Y6P5 492 aa10.86□□□□□ -0.67
SCAF11-209ENST00000547018 IGHV3-43A0A0B4J1X8 118 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 LINC00862A6NCI5 91 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 BCL2L11O43521 198 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 OR8U9P0C7N5 309 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 IGHV3-43DP0DP04 118 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 LPCAT3Q6P1A2 487 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF695Q8IW36 515 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 COL27A1Q8IZC6 1860 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-209ENST00000547018 PRSS33Q8NF86 280 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 PXT1Q8NFP0 134 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 OR6K3Q8NGY3 331 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 OR8U1Q8NH10 309 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 OR1A1Q9P1Q5 309 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 OR6C65A6NJZ3 312 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF705EA8MWA4 302 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-209ENST00000547018 K7EPK0 472 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 M0R1B8 84 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 CD8AP01732 235 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 KIR2DL2P43627 348 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-209ENST00000547018 UCP2P55851 309 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 RPS16P62249 146 aaKnown RBP10.85□□□□□ -0.67
SCAF11-209ENST00000547018 COLCA1Q6ZS62 124 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF808Q8N4W9 903 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-209ENST00000547018 FAM71E2Q8N5Q1 922 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 SCCPDHQ8NBX0 429 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 DEFB108BQ8NET1 73 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 OR5P3Q8WZ94 311 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 OR2F2O95006 317 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 M6PRP20645 277 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 CYCSP99999 105 aaKnown RBP10.85□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF154Q13106 437 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 OR2F1Q13607 317 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF573Q86YE8 665 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 LHFPL5Q8TAF8 219 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 KLF14Q8TD94 323 aaPredicted RBP10.85□□□□□ -0.67
SCAF11-209ENST00000547018 GTF3AQ92664 365 aaKnown RBP10.85□□□□□ -0.67
SCAF11-209ENST00000547018 SARAFQ96BY9 339 aa10.85□□□□□ -0.67
SCAF11-209ENST00000547018 ARPC4-TTLL3A0A0A6YYG9 625 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 TSPAN9O75954 239 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 F12P00748 615 aaPredicted RBP10.84□□□□□ -0.67
SCAF11-209ENST00000547018 RPS2P15880 293 aaKnown RBP10.84□□□□□ -0.67
SCAF11-209ENST00000547018 FGF12P61328 243 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 FAM201AQ5SY85 155 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 CISD2Q8N5K1 135 aaKnown RBP10.84□□□□□ -0.67
SCAF11-209ENST00000547018 SYT3Q9BQG1 590 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 FAM234AQ9H0X4 552 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 RAB18Q9NP72 206 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF391Q9UJN7 358 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 TUSC2O75896 110 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 ZNF818PQ6ZRF7 136 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 SLC35G3Q8N808 338 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 TREM1Q9NP99 234 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 DLL3Q9NYJ7 618 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 PCDHB10Q9UN67 800 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 MEMO1Q9Y316 297 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 FAM96BQ9Y3D0 163 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 ZFYVE26Q68DK2 2539 aa10.84□□□□□ -0.67
SCAF11-209ENST00000547018 NKX2-6A6NCS4 301 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 RPL36A-HNRNPH2H7BZ11 118 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 SMPD2O60906 423 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 CST7O76096 145 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 RPL12P30050 165 aaKnown RBP10.83□□□□□ -0.67
SCAF11-209ENST00000547018 GABRA2P47869 451 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 POLR2GP62487 172 aaKnown RBP eCLIP10.83□□□□□ -0.67
SCAF11-209ENST00000547018 AESQ08117 197 aa10.83□□□□□ -0.67
SCAF11-209ENST00000547018 RGS7BPQ6MZT1 257 aaPredicted RBP10.83□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms