RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CLEC7AQ9BXN2 247 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 OR6C3Q9NZP0 311 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 ST3GAL6Q9Y274 331 aa12.9□□□□□ -0.34
DDX54-204ENST00000546898 NBEAL1Q6ZS30 2694 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 IGHV2-26A0A0B4J1V2 119 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 TRAV24A0A0B4J272 114 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 CLPSL1A2RUU4 121 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 ZNF729A6NN14 1252 aaPredicted RBP12.89□□□□□ -0.35
DDX54-204ENST00000546898 RGS10O43665 173 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 SERPINA2P20848 420 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 RBM11P57052 281 aaKnown RBP12.89□□□□□ -0.35
DDX54-204ENST00000546898 GPR50Q13585 617 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 MED22Q15528 200 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 MPV17LQ2QL34 196 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 PIGYQ3MUY2 71 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 MINOS1Q5TGZ0 78 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 OLFML2AQ68BL7 652 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 LIAT1Q6ZQX7 453 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 LHFPL4Q7Z7J7 247 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 JAGN1Q8N5M9 183 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 SGMS2Q8NHU3 365 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 MALSU1Q96EH3 234 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 OR5M11Q96RB7 305 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 BARHL1Q9BZE3 327 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 RAB18Q9NP72 206 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 MRPS28Q9Y2Q9 187 aaKnown RBP12.89□□□□□ -0.35
DDX54-204ENST00000546898 MINOS1-NBL1R4GNA1 71 aa12.89□□□□□ -0.35
DDX54-204ENST00000546898 A0A1W2PPK0 400 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 VGLL3A8MV65 326 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 PIN1P1O15428 100 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 ATP6V1G2O95670 118 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 MAS1P04201 325 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 GTF2F2P13984 249 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 CRHBPP24387 322 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 CDK2P24941 298 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 DYNC1I2Q13409 638 aaKnown RBP12.88□□□□□ -0.35
DDX54-204ENST00000546898 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 SGCDQ92629 289 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 MUL1Q969V5 352 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 MRPS24Q96EL2 167 aaKnown RBP12.88□□□□□ -0.35
DDX54-204ENST00000546898 PPIL3Q9H2H8 161 aaKnown RBP12.88□□□□□ -0.35
DDX54-204ENST00000546898 BLOC1S6Q9UL45 172 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 RAB26Q9ULW5 256 aa12.88□□□□□ -0.35
DDX54-204ENST00000546898 MEGF11A6BM72 1044 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 HSPB6O14558 160 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 OR7C1O76099 320 aaPredicted RBP12.87□□□□□ -0.35
DDX54-204ENST00000546898 CD34P28906 385 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 SLC22A6Q4U2R8 563 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 ACSM3Q53FZ2 586 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 RBM48Q5RL73 367 aaKnown RBP12.87□□□□□ -0.35
DDX54-204ENST00000546898 PRAMEF5Q5TYX0 476 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 RSBN1Q5VWQ0 802 aaPredicted RBP12.87□□□□□ -0.35
DDX54-204ENST00000546898 UNQ9370/PRO34162Q6UXP9 181 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 Q6ZSV7 163 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 PRSS48Q7RTY5 328 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 LYPD6Q86Y78 171 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 ZNF565Q8N9K5 539 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 OR4D6Q8NGJ1 314 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 WFDC12Q8WWY7 111 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 UFD1Q92890 307 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 UQCC2Q9BRT2 126 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 DPCDQ9BVM2 203 aaPredicted RBP12.87□□□□□ -0.35
DDX54-204ENST00000546898 C16orf95Q9H693 158 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 ISYNA1Q9NPH2 558 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 KIF25Q9UIL4 384 aa12.87□□□□□ -0.35
DDX54-204ENST00000546898 MEIKINA0A087WXM9 373 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 GEMIN2O14893 280 aaKnown RBP12.86□□□□□ -0.35
DDX54-204ENST00000546898 SC5DO75845 299 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 MMP23AO75900 390 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 TSPAN9O75954 239 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 VHLP40337 213 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 GLP1RP43220 463 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 DYNLT3P51808 116 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 AWAT2Q6E213 333 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 GLIPR1L1Q6UWM5 242 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 SUMF2Q8NBJ7 301 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 LINC01006Q8NI28 216 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 PLPPR1Q8TBJ4 325 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 ZNF596Q8TC21 504 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 PHYHIPQ92561 330 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 CNBD2Q96M20 576 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 SPACA1Q9HBV2 294 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 TCF7L1Q9HCS4 588 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 ABCB10Q9NRK6 738 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 ING3Q9NXR8 418 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 RNF114Q9Y508 228 aa12.86□□□□□ -0.35
DDX54-204ENST00000546898 A0A087X0M5 115 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 KBTBD11-OT1A0A1B0GTJ5 212 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 A0A1B0GX30 115 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 A0A1W2PP11 408 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 CGB3P0DN86 165 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 CGB7P0DN87 165 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 PAX6P26367 422 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 HTR1DP28221 377 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 MLLT11Q13015 90 aaPredicted RBP12.85□□□□□ -0.35
DDX54-204ENST00000546898 TPBGQ13641 420 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 TRAM1Q15629 374 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
DDX54-204ENST00000546898 SSX2Q16385 188 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms