RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 PRIMA1Q86XR5 153 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 C11orf42Q8N5U0 333 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 TPRX1Q8N7U7 411 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 ZNF418Q8TF45 676 aaPredicted RBP13.79□□□□□ -0.2
CCDC38-203ENST00000546803 CORO2AQ92828 525 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 TNFRSF14Q92956 283 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 YIPF6Q96EC8 236 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 COQ2Q96H96 371 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 SUCNR1Q9BXA5 334 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 TMEM59Q9BXS4 323 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 OCEL1Q9H607 264 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 SIRT7Q9NRC8 400 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 OR6C3Q9NZP0 311 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
CCDC38-203ENST00000546803 FBLN5Q9UBX5 448 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 ZNF69Q9UC07 566 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 STEAP1Q9UHE8 339 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 ARHGAP32A7KAX9 2087 aa13.79□□□□□ -0.2
CCDC38-203ENST00000546803 IGHV3OR16-10A0A075B7F0 116 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 A0A0A6YYJ9 748 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 LOC100506127A0A0U1RQW1 187 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 IFITM5A6NNB3 132 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 MCRIP1C9JLW8 97 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 AIPO00170 330 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 SMIM18P0DKX4 95 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 OR10A3P58181 314 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 ERVFRD-1P60508 538 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 RPS27AP62979 156 aaKnown RBP13.78□□□□□ -0.2
CCDC38-203ENST00000546803 RBM39Q14498 530 aaKnown RBP13.78□□□□□ -0.2
CCDC38-203ENST00000546803 P2RY14Q15391 338 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 TUSC1Q2TAM9 212 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 OR10K2Q6IF99 312 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 USP43Q70EL4 1123 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 TCF23Q7RTU1 214 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 TRAPPC6BQ86SZ2 158 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 FAM3DQ96BQ1 224 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 URM1Q9BTM9 101 aaKnown RBP13.78□□□□□ -0.2
CCDC38-203ENST00000546803 TM2D1Q9BX74 207 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 HEXA-AS1Q9H8Q6 139 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 TAS2R3Q9NYW6 316 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 ZNF581Q9P0T4 197 aa13.78□□□□□ -0.2
CCDC38-203ENST00000546803 NOTOA8MTQ0 251 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 FUT3P21217 361 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 UBE2E1P51965 193 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 UNC119Q13432 240 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 HES5Q5TA89 166 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 RSBN1Q5VWQ0 802 aaPredicted RBP13.77□□□□□ -0.21
CCDC38-203ENST00000546803 SLC35E4Q6ICL7 350 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 RAB12Q6IQ22 244 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 ZNF565Q8N9K5 539 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 OR51D1Q8NGF3 324 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 NEK7Q8TDX7 302 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 MRPS26Q9BYN8 205 aaKnown RBP13.77□□□□□ -0.21
CCDC38-203ENST00000546803 GAL3ST2Q9H3Q3 398 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 ING3Q9NXR8 418 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 PEX16Q9Y5Y5 336 aa13.77□□□□□ -0.21
CCDC38-203ENST00000546803 MEIKINA0A087WXM9 373 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 RNASEK-C17orf49H0YIS7 233 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 TCF21O43680 179 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 AIREO43918 545 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 PDCD6O75340 191 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 CA11O75493 328 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 SDC2P34741 201 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 CLDN12P56749 244 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 C2orf76Q3KRA6 126 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 KRTAP21-3Q3LHN1 58 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 RBMS3Q6XE24 437 aaKnown RBP13.76□□□□□ -0.21
CCDC38-203ENST00000546803 BRD3OSQ6XYD6 125 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 PLPPR1Q8TBJ4 325 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 C22orf15Q8WYQ4 148 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 NEDD4LQ96PU5 975 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 SLC6A7Q99884 636 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 CENPOQ9BU64 300 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 KIF25Q9UIL4 384 aa13.76□□□□□ -0.21
CCDC38-203ENST00000546803 ANK3Q12955 4377 aaKnown RBP13.75□□□□□ -0.21
CCDC38-203ENST00000546803 TMEM30CPA0ZSE6 113 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 ZNF729A6NN14 1252 aaPredicted RBP13.75□□□□□ -0.21
CCDC38-203ENST00000546803 LDLRAD4O15165 306 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 IGHV1-8P0DP01 117 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 FAM189A2Q15884 450 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 SIGIRRQ6IA17 410 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 NR2C2APQ86WQ0 139 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 BCL6BQ8N143 479 aaPredicted RBP13.75□□□□□ -0.21
CCDC38-203ENST00000546803 FAM89BQ8N5H3 189 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 OR13F1Q8NGS4 319 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 JMJD8Q96S16 334 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 LPAR5Q9H1C0 372 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 KCNK15Q9H427 330 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 RAB22AQ9UL26 194 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 SESN1Q9Y6P5 492 aa13.75□□□□□ -0.21
CCDC38-203ENST00000546803 WNK2Q9Y3S1 2297 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 MEX3AA1L020 520 aaKnown RBP13.74□□□□□ -0.21
CCDC38-203ENST00000546803 NPFFO15130 113 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 CLPXO76031 633 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 CHATP28329 748 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 DLX1P56177 255 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 KLRD1Q13241 179 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 RUSC1-AS1Q66K80 236 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 HCP5Q6MZN7 132 aa13.74□□□□□ -0.21
CCDC38-203ENST00000546803 BRICD5Q6PL45 260 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms