RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 FZR1Q9UM11 496 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 KANTRA0A1W2PQU2 76 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 C3orf80F5H4A9 247 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 PRRG2O14669 202 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 MLNRO43193 412 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 GFRA3O60609 400 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 IFNA21P01568 189 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 ACAA1P09110 424 aaPredicted RBP14.12□□□□□ -0.15
CHFR-224ENST00000545046 ZNF83P51522 516 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 NAAAQ02083 359 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 PHLDA2Q53GA4 152 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 ALKBH2Q6NS38 261 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 CISD2Q8N5K1 135 aaKnown RBP14.12□□□□□ -0.15
CHFR-224ENST00000545046 GALNT14Q96FL9 552 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 OR10C1Q96KK4 312 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 SUCNR1Q9BXA5 334 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 GSX2Q9BZM3 304 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 SLC2A9Q9NRM0 540 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 MSRB2Q9Y3D2 182 aa14.12□□□□□ -0.15
CHFR-224ENST00000545046 IGHV3-64DA0A0J9YX35 117 aa14.11□□□□□ -0.15
CHFR-224ENST00000545046 ANKRD34BA5PLL1 514 aa14.11□□□□□ -0.15
CHFR-224ENST00000545046 LINC00862A6NCI5 91 aa14.11□□□□□ -0.15
CHFR-224ENST00000545046 H7C1Q1 480 aa14.11□□□□□ -0.15
CHFR-224ENST00000545046 M0R1B8 84 aa14.11□□□□□ -0.15
CHFR-224ENST00000545046 GLI4P10075 376 aa14.11□□□□□ -0.15
CHFR-224ENST00000545046 PAN3Q58A45 887 aaKnown RBP14.11□□□□□ -0.15
CHFR-224ENST00000545046 C6orf183Q5T699 404 aa14.11□□□□□ -0.15
CHFR-224ENST00000545046 SPEF1Q9Y4P9 236 aa14.11□□□□□ -0.15
CHFR-224ENST00000545046 TUBAL3A6NHL2 446 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 MPTX1A8MV57 137 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 SIRPB1O00241 398 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 OR2H2O95918 312 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 C3orf36Q3SXR2 165 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 SPIN3Q5JUX0 258 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 RGS7BPQ6MZT1 257 aaPredicted RBP14.1□□□□□ -0.15
CHFR-224ENST00000545046 POC1AQ8NBT0 407 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 DCUN1D4Q92564 292 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 CITED4Q96RK1 184 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 TREM2Q9NZC2 230 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 GSKIPQ9P0R6 139 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 CUL9Q8IWT3 2517 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 PRR14LQ5THK1 2151 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 SHANK1Q9Y566 2161 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 RNF222A6NCQ9 220 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 POM121CA8CG34 1229 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 B3GALNT1O75752 331 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 MZT1Q08AG7 82 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 TMEM187Q14656 261 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 ZNF146Q15072 292 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 ZNF880Q6PDB4 577 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 FAM185AQ8N0U4 392 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 ZNF565Q8N9K5 539 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 SCARB1Q8WTV0 552 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 GLS2Q9UI32 602 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 MGAQ8IWI9 3026 aa14.1□□□□□ -0.15
CHFR-224ENST00000545046 SLC33A1O00400 549 aaPredicted RBP14.09□□□□□ -0.15
CHFR-224ENST00000545046 CRYAAP02489 173 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 OR5AC1P0C628 307 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 PET100P0DJ07 73 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 NUP62P37198 522 aaPredicted RBP14.09□□□□□ -0.15
CHFR-224ENST00000545046 TDGF1P3P51864 188 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 UBA52P62987 128 aaKnown RBP14.09□□□□□ -0.15
CHFR-224ENST00000545046 SP6Q3SY56 376 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 C20orf204Q6ZNR8 217 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 C5orf24Q7Z6I8 188 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 OR4A4PQ8NGN8 299 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 RNF126Q9BV68 326 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 PCDHB10Q9UN67 800 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 TRBV6-7A0A0A0MS04 114 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 RPS10-NUDT3A0A1W2PQS6 291 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 A6NLC8 198 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 BCL2L11O43521 198 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 SPDEFO95238 335 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 HLA-DRB3P79483 266 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 HERPUD1Q15011 391 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 IAH1Q2TAA2 248 aaPredicted RBP14.09□□□□□ -0.15
CHFR-224ENST00000545046 BEX5Q5H9J7 111 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 PRSS54Q6PEW0 395 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 ALKAL2Q6UX46 152 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 Q6ZR03 302 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 DOLPP1Q86YN1 238 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 Q8NA96 180 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 OR11L1Q8NGX0 322 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 SECTM1Q8WVN6 248 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 PIGMQ9H3S5 423 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 MSL2Q9HCI7 577 aa14.09□□□□□ -0.15
CHFR-224ENST00000545046 DLL1O00548 723 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 BMP5P22003 454 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 SHEQ5VZ18 495 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 GGNBP1Q5YKI7 109 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 GFRALQ6UXV0 394 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 LIAT1Q6ZQX7 453 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 MOB1BQ7L9L4 216 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 C11orf53Q8IXP5 236 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 PCNPQ8WW12 178 aaKnown RBP14.08□□□□□ -0.16
CHFR-224ENST00000545046 HES4Q9HCC6 221 aa14.08□□□□□ -0.16
CHFR-224ENST00000545046 FBXO9Q9UK97 447 aaPredicted RBP14.08□□□□□ -0.16
CHFR-224ENST00000545046 A8MXE2 369 aa14.07□□□□□ -0.16
CHFR-224ENST00000545046 RCC1P18754 421 aaPredicted RBP14.07□□□□□ -0.16
CHFR-224ENST00000545046 IL15RAQ13261 267 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms