RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 ADGRG4Q8IZF6 3080 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 NLRC5Q86WI3 1866 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 TAF1LQ8IZX4 1826 aa0.99□□□□□ -2.25
YBX3-214ENST00000544501 SHANK1Q9Y566 2161 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 AKAP9Q99996 3911 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 NAIPQ13075 1403 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 KDM3BQ7LBC6 1761 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 C4BP0C0L5 1744 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 MON2Q7Z3U7 1717 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 DOT1LQ8TEK3 1739 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 IFT172Q9UG01 1749 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 FLT4P35916 1363 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 ATMQ13315 3056 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 MGAQ8IWI9 3026 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 BAZ2AQ9UIF9 1905 aaKnown RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 A0A1W2PRF3 423 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 A0A1W2PRM7 423 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 IGLL5B9A064 214 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 C9JQL5 133 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 H0YIV9 168 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 J3QT63 122 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 DFFAO00273 331 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 TRDMT1O14717 391 aaKnown RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 DEDDO75618 318 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 CPSF4O95639 269 aaKnown RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 GCGP01275 180 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 KLK1P06870 262 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 PMCHP20382 165 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 TEAD1P28347 426 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 GABRR2P28476 465 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 FUSP35637 526 aaKnown RBP eCLIP0.98□□□□□ -2.25
YBX3-214ENST00000544501 TUFMP49411 452 aaKnown RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 CLDN8P56748 225 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 PAFAH1B2P68402 229 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 SPAG1Q07617 926 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 ST3GAL4Q11206 333 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 PYDC2Q56P42 97 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 LDLRAD2Q5SZI1 272 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 CPTPQ5TA50 214 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 THOC7Q6I9Y2 204 aaKnown RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 ULK3Q6PHR2 472 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 WDR59Q6PJI9 974 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 SLC35D2Q76EJ3 337 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 PAGE2Q7Z2X7 111 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 ZCCHC24Q8N2G6 241 aaKnown RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 TRAM1L1Q8N609 369 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 CYB561A3Q8NBI2 242 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 PROKR2Q8NFJ6 384 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 OR5H2Q8NGV7 314 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 OR6K6Q8NGW6 343 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 OR8K3Q8NH51 312 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 PIH1D2Q8WWB5 315 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 ITLN2Q8WWU7 325 aaPredicted RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 OR8D1Q8WZ84 308 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 RNF170Q96K19 258 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 THTPAQ9BU02 230 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 TSGA10Q9BZW7 698 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 C8orf33Q9H7E9 229 aaPredicted RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 C6orf50Q9HD87 102 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 PEF1Q9UBV8 284 aaKnown RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 TFR2Q9UP52 801 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 CFL2Q9Y281 166 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 KLF12Q9Y4X4 402 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 NIPBLQ6KC79 2804 aaeCLIP0.98□□□□□ -2.25
YBX3-214ENST00000544501 LAMA1P25391 3075 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 ITPR2Q14571 2701 aa0.98□□□□□ -2.25
YBX3-214ENST00000544501 FN1P02751 2386 aaKnown RBP0.98□□□□□ -2.25
YBX3-214ENST00000544501 AKAP13Q12802 2813 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 KIAA1109Q2LD37 5005 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 CSMD1Q96PZ7 3565 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 FER1L6Q2WGJ9 1857 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 KMT2EQ8IZD2 1858 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 ARPC4-TTLL3A0A0A6YYG9 625 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 A0A1B0GTQ1 180 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 CENPXA8MT69 81 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 E7EQL1 145 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 H3BQ85 93 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 UPK1AO00322 258 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 CASC3O15234 703 aaKnown RBP0.97□□□□□ -2.25
YBX3-214ENST00000544501 AQP9O43315 295 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 SYNGR2O43760 224 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 NDUFS5O43920 106 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 TPM2P07951 284 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 SEC11BP0C7V7 166 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 STAG3L3P0CL85 134 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 RALBP11234 206 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 SLC6A1P30531 599 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 CSKP41240 450 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 HTR2BP41595 481 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 HCCSP53701 268 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 KLF3P57682 345 aaPredicted RBP0.97□□□□□ -2.25
YBX3-214ENST00000544501 DAOAP59103 153 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 LCN2P80188 198 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 LAMTOR4Q0VGL1 99 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 SLC9A3R2Q15599 337 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 TSC22D1Q15714 1073 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 TOMM34Q15785 309 aaPredicted RBP0.97□□□□□ -2.25
YBX3-214ENST00000544501 ZNF141Q15928 474 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 CDNFQ49AH0 187 aa0.97□□□□□ -2.25
YBX3-214ENST00000544501 PIP5KL1Q5T9C9 394 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms