RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 NELFBQ8WX92 580 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 CCL17Q92583 94 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 APOL4Q9BPW4 351 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 COPS4Q9BT78 406 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 NXF2Q9GZY0 626 aaKnown RBP0.82□□□□□ -2.28
KNTC1-213ENST00000542727 OR2D2Q9H210 308 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 WDR55Q9H6Y2 383 aaPredicted RBP0.82□□□□□ -2.28
KNTC1-213ENST00000542727 ACOT13Q9NPJ3 140 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 DIABLOQ9NR28 239 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 FADS3Q9Y5Q0 445 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 NRCAMQ92823 1304 aa0.82□□□□□ -2.28
KNTC1-213ENST00000542727 DNMT1P26358 1616 aaKnown RBP0.82□□□□□ -2.28
KNTC1-213ENST00000542727 MYH11P35749 1972 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 COL4A2P08572 1712 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 TRAV8-3A0A0A6YYJ7 113 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 ARGFXA6NJG6 315 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 ZNF593O00488 134 aaPredicted RBP0.81□□□□□ -2.28
KNTC1-213ENST00000542727 RFXANKO14593 260 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 SH2D1AO60880 128 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 MYO1DO94832 1006 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 STAG3L2P0CL84 134 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 GIMD1P0DJR0 217 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 OR12D1P0DN82 309 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 ZNF3P17036 446 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 PRKACAP17612 351 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 CRABP1P29762 137 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 EVI2BP34910 448 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 FOXF1Q12946 379 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 TSPAN31Q12999 210 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 APOFQ13790 326 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 PCOTHQ58A44 107 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 RESP18Q5W5W9 173 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 TMEM215Q68D42 235 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 TPGS1Q6ZTW0 290 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 PDCL2Q8N4E4 241 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 ZNF321PQ8N8H1 164 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 DNAAF3Q8N9W5 541 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 FER1L6-AS1Q8NA97 138 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 OR6N2Q8NGY6 317 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 OR51Q1Q8NH59 317 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 PDCD6IPQ8WUM4 868 aaKnown RBP0.81□□□□□ -2.28
KNTC1-213ENST00000542727 CDKL2Q92772 493 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 TOP1MTQ969P6 601 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 HIST1H2BAQ96A08 127 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 PYURFQ96I23 114 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 TXNDC17Q9BRA2 123 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 MAP1LC3CQ9BXW4 147 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 ARL6Q9H0F7 186 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 GAL3ST2Q9H3Q3 398 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 PRORYQ9H606 182 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 CRLF2Q9HC73 371 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 VCX3AQ9NNX9 186 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 SLC23A2Q9UGH3 650 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 HSPE1-MOB4S4R3N1 261 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 KIF27Q86VH2 1401 aa0.81□□□□□ -2.28
KNTC1-213ENST00000542727 MDC1Q14676 2089 aaKnown RBP0.8□□□□□ -2.28
KNTC1-213ENST00000542727 PTPRBP23467 1997 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 PCDH15Q96QU1 1955 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 IGHV1-45A0A0A0MS14 117 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 GOLGA6L7A0A1B0GV03 622 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 A0A1B0GXF2 115 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 PRMT5O14744 637 aaPredicted RBP0.8□□□□□ -2.28
KNTC1-213ENST00000542727 LECT2O14960 151 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 SC5DO75845 299 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 CECR9P0C854 216 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 PSMB9P28065 219 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 RANBP1P43487 201 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 CBX5P45973 191 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 PLTPP55058 493 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 GUSBP1Q15486 140 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 GOLGA7BQ2TAP0 167 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 TMEM176BQ3YBM2 270 aaPredicted RBP0.8□□□□□ -2.28
KNTC1-213ENST00000542727 ACSBG2Q5FVE4 666 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 C10orf91Q5T1B1 145 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 SLC25A25Q6KCM7 469 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 C16orf87Q6PH81 154 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 ASCC1Q8N9N2 400 aaKnown RBP0.8□□□□□ -2.28
KNTC1-213ENST00000542727 GATD1Q8NB37 220 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 OR8G5Q8NG78 346 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 SPPL2BQ8TCT7 592 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 DOK4Q8TEW6 326 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 CASTOR1Q8WTX7 329 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 REEP6Q96HR9 211 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 CIB1Q99828 191 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 BCL2L14Q9BZR8 327 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 MFSD1Q9H3U5 465 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 VAPAQ9P0L0 249 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 PHLDA3Q9Y5J5 127 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 COL4A1P02462 1669 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 MED13Q9UHV7 2174 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 ATRNO75882 1429 aa0.8□□□□□ -2.28
KNTC1-213ENST00000542727 ARAP3Q8WWN8 1544 aa0.79□□□□□ -2.28
KNTC1-213ENST00000542727 DSCAML1Q8TD84 2053 aa0.79□□□□□ -2.28
KNTC1-213ENST00000542727 LAMB2P55268 1798 aa0.79□□□□□ -2.28
KNTC1-213ENST00000542727 VPS37CA5D8V6 355 aaPredicted RBP0.79□□□□□ -2.28
KNTC1-213ENST00000542727 C17orf98A8MV24 154 aa0.79□□□□□ -2.28
KNTC1-213ENST00000542727 TRAPPC3O43617 180 aa0.79□□□□□ -2.28
KNTC1-213ENST00000542727 KDELR3O43731 214 aa0.79□□□□□ -2.28
KNTC1-213ENST00000542727 SFTPCP11686 197 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms