RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 SYNGR3O43761 229 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 SOX14O95416 240 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 DDAH2O95865 285 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 KRASP01116 189 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 CGAP01215 116 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 APOA2P02652 100 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 AMY2AP04746 511 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 EDN1P05305 212 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 LINC00869P0C866 280 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 ZNF43P17038 809 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 HTR1DP28221 377 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 SLC6A6P31641 620 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 FCGR2CP31995 323 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 DRD3P35462 400 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 ZNF93P35789 620 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 KIR2DL1P43626 348 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 STC1P52823 247 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 PGGT1BP53609 377 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 YPEL3P61236 119 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 PITX1P78337 314 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 DMWDQ09019 674 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 FOXL1Q12952 345 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 EXOSC7Q15024 291 aaKnown RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 CDK5R1Q15078 307 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 SGCBQ16585 318 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 OR10J3Q5JRS4 329 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 PSMG4Q5JS54 123 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 VAX1Q5SQQ9 334 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 BVES-AS1Q5T3Y7 98 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 TMEM78Q5T7P6 136 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 RHBDD2Q6NTF9 364 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 Q6ZS92 163 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 Q6ZWC4 215 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 RPS27LQ71UM5 84 aaKnown RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 CDC20BQ86Y33 519 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 RYBPQ8N488 228 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 OR4F17Q8NGA8 305 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 BAHD1Q8TBE0 780 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 PLPPR1Q8TBJ4 325 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 HMGB4Q8WW32 186 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 NEUROG1Q92886 237 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 PIGTQ969N2 578 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 IGSF8Q969P0 613 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 LENG9Q96B70 501 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 RNF125Q96EQ8 232 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 DNAJC30Q96LL9 226 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 VSTM2LQ96N03 204 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 NSUN5Q96P11 429 aaKnown RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 OR4F4Q96R69 305 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 GPER1Q99527 375 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 NDFIP1Q9BT67 221 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 GPR174Q9BXC1 333 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 WDR61Q9GZS3 305 aaKnown RBP4.52□□□□□ -1.69
SNHG1-218ENST00000541615 COA1Q9GZY4 146 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 CST11Q9H112 138 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 MS4A6AQ9H2W1 248 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 GPR84Q9NQS5 396 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 TMEM30AQ9NV96 361 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 KLHL13Q9P2N7 655 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 GALPQ9UBC7 116 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 OR5V1Q9UGF6 321 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 ZNF780BQ9Y6R6 833 aa4.52□□□□□ -1.69
SNHG1-218ENST00000541615 PIGBOS1A0A0B4J2F0 54 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 SMIM9A6NGZ8 99 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 TMEM229AB2RXF0 380 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 F2RL2O00254 374 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 DHHO43323 396 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 B4GALT3O60512 393 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 GCM2O75603 506 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 CEACAM4O75871 244 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 ETHE1O95571 254 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 APBA3O96018 575 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 MT-ND6P03923 174 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 CATP04040 527 aaKnown RBP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 CD3DP04234 171 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 GPX1P07203 203 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 CT45A10P0DMU9 189 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 FABP2P12104 132 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 ACP5P13686 325 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 HIST1H1CP16403 213 aaKnown RBP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 CRISP2P16562 243 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 TNFRSF1AP19438 455 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 CDKN2AP42771 156 aaKnown RBP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 UQCRFS1P47985 274 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 PCBP3P57721 371 aaKnown RBP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 RPS28P62857 69 aaKnown RBP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 SLC35B1P78383 322 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 ZXDAP98168 799 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 EWSR1Q01844 656 aaKnown RBP eCLIP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 LTBQ06643 244 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 KLRD1Q13241 179 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 IL13RA2Q14627 380 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 ICAM4Q14773 271 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 PMVKQ15126 192 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 CPSF6Q16630 551 aaKnown RBP eCLIP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 LRRC75BQ2VPJ9 315 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 ZNF791Q3KP31 576 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 SLC25A53Q5H9E4 307 aa4.51□□□□□ -1.69
SNHG1-218ENST00000541615 PEAR1Q5VY43 1037 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-218ENST00000541615 SLC25A34Q6PIV7 304 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms