RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SMIM31A0A1B0GVY4 71 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 NME4O00746 187 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 ICOSLGO75144 302 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 SNRNP200O75643 2136 aaKnown RBP4.47□□□□□ -1.69
DDB1-219ENST00000541513 EIF3GO75821 320 aaKnown RBP eCLIP4.47□□□□□ -1.69
DDB1-219ENST00000541513 HPRT1P00492 218 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 LALBAP00709 142 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 IGHV3-9P01782 118 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 CRYAAP02489 173 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 CD74P04233 296 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 ARG1P05089 322 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 SNRPCP09234 159 aaKnown RBP4.47□□□□□ -1.69
DDB1-219ENST00000541513 OR9G9P0C7N8 305 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 HIST1H1EP10412 219 aaKnown RBP4.47□□□□□ -1.69
DDB1-219ENST00000541513 ZNF250P15622 560 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 UGT2B7P16662 529 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 TNFRSF1BP20333 461 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 PVALBP20472 110 aaPredicted RBP4.47□□□□□ -1.69
DDB1-219ENST00000541513 ANOS1P23352 680 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 PSMA1P25786 263 aaKnown RBP4.47□□□□□ -1.69
DDB1-219ENST00000541513 PLA2G5P39877 138 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 RPL5P46777 297 aaKnown RBP4.47□□□□□ -1.69
DDB1-219ENST00000541513 RORCP51449 518 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 AKR1D1P51857 326 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 CRADDP78560 199 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 IFITM2Q01629 132 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 FZD2Q14332 565 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 TRAM1Q15629 374 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 RNF212Q495C1 297 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 DNLZQ5SXM8 178 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 FAM27D1Q5T7N8 215 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 UBE2UQ5VVX9 321 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 FBXW9Q5XUX1 488 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 ZNF626Q68DY1 528 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 LPCAT3Q6P1A2 487 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 TFAP2EQ6VUC0 442 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 SPNS3Q6ZMD2 512 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 Q6ZSR6 202 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 VRK3Q8IV63 474 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 SLC22A18ASQ8N1D0 253 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 ZNF441Q8N8Z8 693 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 SYT8Q8NBV8 401 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 ZNRF1Q8ND25 227 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 OR2A1Q8NGT9 310 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 OR13D1Q8NGV5 346 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 OR10X1Q8NGY0 326 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 C14orf144Q96I85 54 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 PPP3R2Q96LZ3 170 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 ZNF778Q96MU6 729 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 COL21A1Q96P44 957 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 OR5M11Q96RB7 305 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 CDCA4Q9BXL8 241 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 TPT1P8Q9HAU6 139 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 SLC2A6Q9UGQ3 507 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 ZNF391Q9UJN7 358 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 CES1P1Q9UKY3 287 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 HEATR5BQ9P2D3 2071 aa4.47□□□□□ -1.69
DDB1-219ENST00000541513 DNAH14Q0VDD8 3507 aa4.46□□□□□ -1.69
DDB1-219ENST00000541513 SEC16AO15027 2179 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 IGHV3-20A0A0C4DH32 117 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 TINCRA0A1B0GVN0 87 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 ZNF705EA8MWA4 302 aaPredicted RBP4.46□□□□□ -1.7
DDB1-219ENST00000541513 NPIPB9F8W1W9 429 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 G3V2T6 193 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 M0R1B8 84 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 CCL22O00626 93 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 FABP7O15540 132 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 ENSAO43768 121 aaKnown RBP4.46□□□□□ -1.7
DDB1-219ENST00000541513 UGT2B11O75310 529 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 RP2O75695 350 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 SLC25A14O95258 325 aaPredicted RBP4.46□□□□□ -1.7
DDB1-219ENST00000541513 ATP6V1G2O95670 118 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 TBX6O95947 436 aaPredicted RBP4.46□□□□□ -1.7
DDB1-219ENST00000541513 C1GALT1C1LP0DN25 315 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 SPI1P17947 270 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 CERS1P27544 350 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 RPA3P35244 121 aaPredicted RBP4.46□□□□□ -1.7
DDB1-219ENST00000541513 RPL35P42766 123 aaKnown RBP4.46□□□□□ -1.7
DDB1-219ENST00000541513 TTPAP49638 278 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 GSK3BP49841 420 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 RBP2P50120 134 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 UBE2E1P51965 193 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 MFAP2P55001 183 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 DLX6P56179 175 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 ECH1Q13011 328 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 MPPED2Q15777 294 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 MAPK14Q16539 360 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 ECSCRQ19T08 205 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 RNASE10Q5GAN6 216 aaKnown RBP4.46□□□□□ -1.7
DDB1-219ENST00000541513 OR2B11Q5JQS5 317 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 SPANXN3Q5MJ09 141 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 FHL5Q5TD97 284 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 HBMQ6B0K9 141 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 REP15Q6BDI9 236 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 ZNF774Q6NX45 483 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 SH2D5Q6ZV89 423 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 PRSS41Q7RTY9 318 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 GRINAQ7Z429 371 aa4.46□□□□□ -1.7
DDB1-219ENST00000541513 FAM19A5Q7Z5A7 132 aaPredicted RBP4.46□□□□□ -1.7
DDB1-219ENST00000541513 CPNE9Q8IYJ1 553 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms