RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 CCDC58Q4VC31 144 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 TMPRSS11AQ6ZMR5 421 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 ACP7Q6ZNF0 438 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 SERPINA12Q8IW75 414 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 SAXO1Q8IYX7 474 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.67□□□□□ -1.66
SUDS3-202ENST00000541280 ZSCAN4Q8NAM6 433 aaPredicted RBP4.67□□□□□ -1.66
SUDS3-202ENST00000541280 C19orf18Q8NEA5 215 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 SSMEM1Q8WWF3 244 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 BORCS8Q96FH0 119 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 MBOAT4Q96T53 435 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 TBX5Q99593 518 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 NRIP2Q9BQI9 281 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 PCGF1Q9BSM1 259 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 COMMD4Q9H0A8 199 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 SIRPDQ9H106 197 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 VCXQ9H320 206 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 HES4Q9HCC6 221 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 SNTG1Q9NSN8 517 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 ACOXLQ9NUZ1 547 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 SMPD3Q9NY59 655 aaPredicted RBP4.67□□□□□ -1.66
SUDS3-202ENST00000541280 IL36RNQ9UBH0 155 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 HHLA2Q9UM44 414 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 PCDHGB5Q9Y5G0 923 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 HRNRQ86YZ3 2850 aaPredicted RBP4.67□□□□□ -1.66
SUDS3-202ENST00000541280 FLNAP21333 2647 aaKnown RBP4.67□□□□□ -1.66
SUDS3-202ENST00000541280 ARFGEF3Q5TH69 2177 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 NAV3Q8IVL0 2385 aa4.67□□□□□ -1.66
SUDS3-202ENST00000541280 IGKV1D-17A0A075B6S4 117 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 TRAV40A0A0B4J280 105 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 FAM230AA0A1W2PPH8 454 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 A0A1W2PQ09 198 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 RFPL4AA6NLU0 287 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 RFPL4AL1F8VTS6 287 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 H0YAE9 185 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 J3QLW9 94 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 M0R129 80 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 MAGEB3O15480 346 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 RHBDL1O75783 438 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 RBP4P02753 201 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 PRSS2P07478 247 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 FBP1P09467 338 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 IGHV4-38-2P0DP08 117 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 DBTP11182 482 aaKnown RBP4.66□□□□□ -1.66
SUDS3-202ENST00000541280 ZNF19P17023 458 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 GABRB1P18505 474 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 ATF1P18846 271 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 MYL12AP19105 171 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 PCP4P48539 62 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 CAPZA1P52907 286 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 OR12D2P58182 307 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 ERVK11-1P61568 191 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 RPL31P62899 125 aaKnown RBP4.66□□□□□ -1.66
SUDS3-202ENST00000541280 MEF2CQ06413 473 aaPredicted RBP4.66□□□□□ -1.66
SUDS3-202ENST00000541280 HNF4GQ14541 408 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 SLC9A3R2Q15599 337 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 UBE2V2Q15819 145 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 AANATQ16613 207 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 DGUOKQ16854 277 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 TP53I3Q53FA7 332 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 SPIN3Q5JUX0 258 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 GDPGP1Q6ZNW5 385 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 SSX6Q7RTT6 188 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 C16orf82Q7Z2V1 217 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 PRSS35Q8N3Z0 413 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 DHRSXQ8N5I4 330 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 FAM216BQ8N7L0 139 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 ZNF676Q8N7Q3 588 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 OR5T2Q8NGG2 359 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 OR5R1Q8NH85 324 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 C22orf15Q8WYQ4 148 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 H1FXQ92522 213 aaKnown RBP4.66□□□□□ -1.66
SUDS3-202ENST00000541280 DYRK2Q92630 601 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 LHX4Q969G2 390 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 FGGYQ96C11 551 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 LGALS12Q96DT0 336 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 CEP19Q96LK0 163 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 GAFA1Q96PS6 74 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 TBX15Q96SF7 602 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 SLC29A1Q99808 456 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 FGF23Q9GZV9 251 aaPredicted RBP4.66□□□□□ -1.66
SUDS3-202ENST00000541280 WDR13Q9H1Z4 485 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 PPP1R3EQ9H7J1 279 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 BEX1Q9HBH7 125 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 FGF20Q9NP95 211 aaPredicted RBP4.66□□□□□ -1.66
SUDS3-202ENST00000541280 PCDHB16Q9NRJ7 776 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 GPR173Q9NS66 373 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 ONECUT1Q9UBC0 465 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 ZNF222Q9UK12 451 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 MAB21L2Q9Y586 359 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 MMP24Q9Y5R2 645 aa4.66□□□□□ -1.66
SUDS3-202ENST00000541280 HEATR1Q9H583 2144 aaKnown RBP4.66□□□□□ -1.66
SUDS3-202ENST00000541280 RTTNQ86VV8 2226 aa4.65□□□□□ -1.66
SUDS3-202ENST00000541280 TRBV2A0A0J9YWF9 115 aa4.65□□□□□ -1.67
SUDS3-202ENST00000541280 LOC107986453A0A1B0GWG9 222 aa4.65□□□□□ -1.67
SUDS3-202ENST00000541280 hADV38S2A0JD32 116 aa4.65□□□□□ -1.67
SUDS3-202ENST00000541280 OR4C45A6NMZ5 311 aa4.65□□□□□ -1.67
SUDS3-202ENST00000541280 K7N7A8 449 aa4.65□□□□□ -1.67
SUDS3-202ENST00000541280 SH2D1BO14796 132 aa4.65□□□□□ -1.67
SUDS3-202ENST00000541280 NPFFO15130 113 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms