RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 A0A096LPE4 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 A0A1W2PPZ6 126 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 SYNGR3O43761 229 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 CHST1O43916 411 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 RNF224P0DH78 156 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 CRYGSP22914 178 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 AFF3P51826 1226 aaKnown RBP8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 RAB2AP61019 212 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 PSG4Q00888 419 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 HERPUD1Q15011 391 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 LCN15Q6UWW0 184 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 SSX7Q7RTT5 188 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF695Q8IW36 515 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 MAML2Q8IZL2 1156 aaPredicted RBP8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF611Q8N823 705 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR14L1PQ8NHC6 308 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 TMEM54Q969K7 222 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF286AQ9HBT8 521 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 DKKL1Q9UK85 242 aa8.92□□□□□ -0.98
CDC42SE1-207ENST00000540998 WRBO00258 174 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 DKK1O94907 266 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 IFNA17P01571 189 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 BCL3P20749 454 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 CTSSP25774 331 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 MSX1P28360 303 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 RPS16P62249 146 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF880Q6PDB4 577 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 PRR18Q8N4B5 295 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR1K1Q8NGR3 316 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 NEK7Q8TDX7 302 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 CCDC74BQ96LY2 380 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 FGF23Q9GZV9 251 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 FOXD3Q9UJU5 478 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 RARRES3Q9UL19 164 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 IGHV5-10-1A0A0J9YXX1 117 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 BCAT2O15382 392 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 CD55P08174 381 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 RFPL3SP0C7P2 107 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 EDN3P14138 238 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 FOXG1P55316 489 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 RAB11AP62491 216 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 FAM189A2Q15884 450 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 OR1F12Q8NHA8 337 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 ABHD3Q8WU67 409 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF845Q96IR2 970 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 SUCNR1Q9BXA5 334 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF665Q9H7R5 613 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 TUBA4BQ9H853 241 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 WSB1Q9Y6I7 421 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 CXCL13O43927 109 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 SCAF4O95104 1147 aaKnown RBP8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 IAPPP10997 89 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 FABP4P15090 132 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 HOXA5P20719 270 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 MALLQ13021 153 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 GAMTQ14353 236 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 IL13RA2Q14627 380 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 CEACAM16Q2WEN9 425 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 C10orf128Q5T292 105 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 GPR157Q5UAW9 335 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 WDR25Q64LD2 544 aaPredicted RBP8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF600Q6ZNG1 722 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 C20orf204Q6ZNR8 217 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 VASH2Q86V25 355 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 THNSL2Q86YJ6 484 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 NECAP1Q8NC96 275 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 ADPRHL1Q8NDY3 354 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 EXTL1Q92935 676 aa8.91□□□□□ -0.98
CDC42SE1-207ENST00000540998 IGKV1-6A0A0C4DH72 117 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 ARGFXA6NJG6 315 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 TRDCB7Z8K6 153 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 IFNL4K9M1U5 179 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 PDCD6O75340 191 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 TCN2P20062 427 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 GPX4P36969 197 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 SUCLG1P53597 346 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 STARD6P59095 220 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 RPL23AP62750 156 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 VAMP2P63027 116 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 HOXA4Q00056 320 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 HIKESHIQ53FT3 197 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 KHDC3LQ587J8 217 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 ZNF385CQ66K41 422 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 LURAP1LQ8IV03 231 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 SELENOHQ8IZQ5 122 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 GPR137CQ8N3F9 429 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 FRZBQ92765 325 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 CPNE4Q96A23 557 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 TMEM222Q9H0R3 208 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 BCO1Q9HAY6 547 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 IGLV3-32A0A0A0MS00 114 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 DEFA4P12838 97 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 GPM6AP51674 278 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 RBM11P57052 281 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 PCOLCEQ15113 449 aa8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 WDR74Q6RFH5 385 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 CPEB3Q8NE35 698 aaKnown RBP8.9□□□□□ -0.98
CDC42SE1-207ENST00000540998 ABHD5Q8WTS1 349 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms