RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 MYL12BO14950 172 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 OGG1O15527 345 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 FBXO24O75426 580 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 OPN1MWP04001 364 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 LIMS3P0CW19 117 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 LIMS4P0CW20 117 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 OPN1MW2P0DN77 364 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 OPN1MW3P0DN78 364 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 GTF2F2P13984 249 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 BDKRB2P30411 391 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 VDAC2P45880 294 aaPredicted RBP8.39□□□□□ -1.07
CDCA3-208ENST00000540683 DLX1P56177 255 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 ZP1P60852 638 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 PRB3Q04118 309 aaPredicted RBP8.39□□□□□ -1.07
CDCA3-208ENST00000540683 AESQ08117 197 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 RIPK1Q13546 671 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 RBM39Q14498 530 aaKnown RBP8.39□□□□□ -1.07
CDCA3-208ENST00000540683 ZNF529Q6P280 563 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 TRAT1Q6PIZ9 186 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 CRIP3Q6Q6R5 217 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 LHFPL4Q7Z7J7 247 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 KLHDC1Q8N7A1 406 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 Q8NFD4 153 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 CNIH3Q8TBE1 160 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 RPEQ96AT9 228 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 ERGIC3Q9Y282 383 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 HILPDAQ9Y5L2 63 aa8.39□□□□□ -1.07
CDCA3-208ENST00000540683 IGKV1-12A0A0C4DH73 117 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 CA11O75493 328 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 WBP4O75554 376 aaKnown RBP8.38□□□□□ -1.07
CDCA3-208ENST00000540683 GPX5O75715 221 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 CLIC3O95833 236 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 IGKV1D-12P01611 117 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 CD1AP06126 327 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 VSIG10L2P0DP72 767 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 ATF4P18848 351 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-208ENST00000540683 IL3RAP26951 378 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 GLP1RP43220 463 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 GLIPR1P48060 266 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 RAB7AP51149 207 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 MADCAM1Q13477 382 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 Q499Y3 187 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 DDI2Q5TDH0 399 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 Q6P435 159 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 ASCL4Q6XD76 172 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 REC114Q7Z4M0 266 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 NDUFA11Q86Y39 141 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 OSR2Q8N2R0 312 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 TPRX1Q8N7U7 411 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 NKAIN3Q8N8D7 197 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 OR10AC1Q8NH08 325 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 C17orf50Q8WW18 174 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 CFHR4Q92496 578 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 SPACA5Q96QH8 159 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 NR1H4Q96RI1 486 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-208ENST00000540683 LINC00574Q9H8X3 128 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 IL36RNQ9UBH0 155 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 GHRLQ9UBU3 117 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 ING4Q9UNL4 249 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 FOXJ3Q9UPW0 622 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 ST3GAL6Q9Y274 331 aa8.38□□□□□ -1.07
CDCA3-208ENST00000540683 TMEM30CPA0ZSE6 113 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A10PA6NDY2 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A18PA6NE21 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A16PA6NEW6 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A20PA6NIJ5 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A7PA6NKC0 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A22PA8MWA6 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A12PA8MX19 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A5PA8MXJ8 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A23PA8MXZ1 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 BUB1B-PAK6H3BSN5 160 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 GABRPO00591 440 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 OR7C1O76099 320 aaPredicted RBP8.37□□□□□ -1.07
CDCA3-208ENST00000540683 OR2F2O95006 317 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 HTR3BO95264 441 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 IL1AP01583 271 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 IGLV1-47P01700 117 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 GLAP06280 429 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A15PP0C7V4 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A13PP0C7W8 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A14PP0C7W9 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FAM90A24PP0C7X0 464 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 FSTP19883 344 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 NFYBP25208 207 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 CAPGP40121 348 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 SOX2P48431 317 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 ETV1P50549 477 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 RBM11P57052 281 aaKnown RBP8.37□□□□□ -1.07
CDCA3-208ENST00000540683 DEFA6Q01524 100 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 SRSF4Q08170 494 aaKnown RBP8.37□□□□□ -1.07
CDCA3-208ENST00000540683 ST3GAL4Q11206 333 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 DOC2BQ14184 412 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 ATXN7L3Q14CW9 347 aaPredicted RBP8.37□□□□□ -1.07
CDCA3-208ENST00000540683 RCN1Q15293 331 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 HLA-DRB5Q30154 266 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 Q3ZCU0 254 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 PDLIM3Q53GG5 364 aaPredicted RBP8.37□□□□□ -1.07
CDCA3-208ENST00000540683 PLA1AQ53H76 456 aa8.37□□□□□ -1.07
CDCA3-208ENST00000540683 PRAMEF5Q5TYX0 476 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms