RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 FAM90A12PA8MX19 464 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 FAM90A5PA8MXJ8 464 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 H0YJX3 145 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 EBAG9O00559 213 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 GPX5O75715 221 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 AMY1AP04745 511 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 AMY2AP04746 511 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 FAM90A15PP0C7V4 464 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 FAM90A13PP0C7W8 464 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 FAM90A14PP0C7W9 464 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 FAM90A24PP0C7X0 464 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 BRS3P32247 399 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 ETV1P50549 477 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 PRRX1P54821 245 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 CD83Q01151 205 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 SCN1BQ07699 218 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 SMN1Q16637 294 aaKnown RBP10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 XAF1Q6GPH4 301 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 SLC16A12Q6ZSM3 486 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 ZNF565Q8N9K5 539 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 ZNF485Q8NCK3 441 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 OR10A7Q8NGE5 316 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 OR4D6Q8NGJ1 314 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 OR51A2Q8NGJ7 313 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 KIRREL1Q96J84 757 aa10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 RBM14Q96PK6 669 aaKnown RBP10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 SIRT4Q9Y6E7 314 aaPredicted RBP10.48□□□□□ -0.73
SEMA4D-223ENST00000540475 IRGMA1A4Y4 181 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 G3V4G9 280 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 MAGEB3O15480 346 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 OR2F2O95006 317 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 CEACAM3P40198 252 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 ATXN7L3Q14CW9 347 aaPredicted RBP10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 UTF1Q5T230 341 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 TPTE2P1Q5T6R2 138 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 RSBN1Q5VWQ0 802 aaPredicted RBP10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 THNSL2Q86YJ6 484 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 ZNF555Q8NEP9 628 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 WFDC9Q8NEX5 89 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 OR9G1Q8NH87 305 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 TSEN15Q8WW01 171 aaKnown RBP10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 SMIM19Q96E16 107 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 AKR1E2Q96JD6 320 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 CITED2Q99967 270 aaPredicted RBP10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 BARHL1Q9BZE3 327 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 C8orf4Q9NR00 106 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 BABAM2Q9NXR7 383 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 TAS2R4Q9NYW5 299 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 DIMT1Q9UNQ2 313 aaKnown RBP10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 NOTCH3Q9UM47 2321 aa10.47□□□□□ -0.73
SEMA4D-223ENST00000540475 DNAH9Q9NYC9 4486 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 TRBV5-5A0A0J9YX44 114 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 J3QR06 171 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 TOR1AO14656 332 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 LALBAP00709 142 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 CD2P06729 351 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 IGFBP3P17936 291 aaPredicted RBP10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 C21orf33P30042 268 aaPredicted RBP10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 VDAC2P45880 294 aaPredicted RBP10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 ARHGDIBP52566 201 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 RPS11P62280 158 aaKnown RBP eCLIP10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 ADARB1P78563 741 aaKnown RBP10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 ZSCAN26Q16670 478 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 FBLN7Q53RD9 439 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 DMKNQ6E0U4 476 aaPredicted RBP10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 CCDC144NLQ6NUI1 221 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 TMPRSS11AQ6ZMR5 421 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 C1QL4Q86Z23 238 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 TNFAIP8L1Q8WVP5 186 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 STMN2Q93045 179 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 TMEM106AQ96A25 262 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 MMP28Q9H239 520 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 TMEM138Q9NPI0 162 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 PCDHB16Q9NRJ7 776 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 KIF25Q9UIL4 384 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 ZNF281Q9Y2X9 895 aa10.46□□□□□ -0.73
SEMA4D-223ENST00000540475 XPNPEP2O43895 674 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 IL1AP01583 271 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 CD24P25063 80 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 SOX2P48431 317 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 RSU1Q15404 277 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 TMEM95Q3KNT9 176 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 PIGYQ3MUY2 71 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 PAN3Q58A45 887 aaKnown RBP10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 TCTEX1D4Q5JR98 221 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 OR2G6Q5TZ20 316 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 TTC23Q5W5X9 447 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 LINC00596Q86U02 117 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 PACRGLQ8N7B6 248 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 OR4F17Q8NGA8 305 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 OR52N1Q8NH53 320 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 PLPPR1Q8TBJ4 325 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 OR4F4Q96R69 305 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 GPER1Q99527 375 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 SLC25A33Q9BSK2 321 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 CALYQ9NYX4 217 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 IDI2-AS1Q9NZ38 188 aa10.45□□□□□ -0.74
SEMA4D-223ENST00000540475 EXOSC1Q9Y3B2 195 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms