RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GTF2F2P13984 249 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 RAB3BP20337 219 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 FBN1P35555 2871 aaKnown RBP10.71□□□□□ -0.69
CHFR-216ENST00000538235 RPS27AP62979 156 aaKnown RBP10.71□□□□□ -0.69
CHFR-216ENST00000538235 MXD1Q05195 221 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 LSAMPQ13449 338 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 RAB11BQ15907 218 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 C17orf58Q2M2W7 97 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 MOGAT2Q3SYC2 334 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 CHRFAM7AQ494W8 412 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 PAN3Q58A45 887 aaKnown RBP10.71□□□□□ -0.69
CHFR-216ENST00000538235 METTL11BQ5VVY1 283 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 CD276Q5ZPR3 534 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 KIR3DL3Q8N743 410 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 OR13A1Q8NGR1 328 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 C17orf50Q8WW18 174 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 DPCDQ9BVM2 203 aaPredicted RBP10.71□□□□□ -0.69
CHFR-216ENST00000538235 TM2D1Q9BX74 207 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 MRPS26Q9BYN8 205 aaKnown RBP10.71□□□□□ -0.69
CHFR-216ENST00000538235 PLGRKTQ9HBL7 147 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 KIF25Q9UIL4 384 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 CDC42EP3Q9UKI2 254 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 SSR3Q9UNL2 185 aa10.71□□□□□ -0.69
CHFR-216ENST00000538235 A0A1W2PQ09 198 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 C17orf98A8MV24 154 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 MGST3O14880 152 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 SOCS1O15524 211 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 AIREO43918 545 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 TOX4O94842 621 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 BPNT1O95861 308 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 PAHP00439 452 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 CSTBP04080 98 aaKnown RBP10.7□□□□□ -0.7
CHFR-216ENST00000538235 LIPFP07098 398 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 FAM157CP0CG43 387 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 SNRPBP14678 240 aaKnown RBP10.7□□□□□ -0.7
CHFR-216ENST00000538235 EPHA1P21709 976 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 MYL9P24844 172 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 PAX6P26367 422 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 CHATP28329 748 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 RPL5P46777 297 aaKnown RBP10.7□□□□□ -0.7
CHFR-216ENST00000538235 CTF1Q16619 201 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 MPV17LQ2QL34 196 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 C2orf76Q3KRA6 126 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 OLFML2AQ68BL7 652 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 FIP1L1Q6UN15 594 aaKnown RBP10.7□□□□□ -0.7
CHFR-216ENST00000538235 BTNL3Q6UXE8 466 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 ZNF782Q6ZMW2 699 aaPredicted RBP10.7□□□□□ -0.7
CHFR-216ENST00000538235 OR5H6Q8NGV6 325 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 FAM3DQ96BQ1 224 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 SLC6A7Q99884 636 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 SULT4A1Q9BR01 284 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 MRI1Q9BV20 369 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 BEX2Q9BXY8 128 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 BARHL1Q9BZE3 327 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 SLITRK2Q9H156 845 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 STEAP1Q9UHE8 339 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 KPTNQ9Y664 436 aa10.7□□□□□ -0.7
CHFR-216ENST00000538235 A0A1W2PRD5 423 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 A0A1W2PRF3 423 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 A0A1W2PRM7 423 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 ODAMA1E959 279 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 AIPO00170 330 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 GPR37O15354 613 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 GABARAPO95166 117 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 SRD5A1P18405 259 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 ERP29P30040 261 aaKnown RBP10.69□□□□□ -0.7
CHFR-216ENST00000538235 BMXP51813 675 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 TMEM50BP56557 158 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 VBP1P61758 197 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 PLAC9Q5JTB6 97 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 PRAMEF5Q5TYX0 476 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 SFXN4Q6P4A7 337 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 GDPD3Q7L5L3 318 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 C6orf201Q7Z4U5 140 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 CHST4Q8NCG5 386 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 UBALD1Q8TB05 177 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 LGALS14Q8TCE9 139 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 LHX4Q969G2 390 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 FOXRED1Q96CU9 486 aaPredicted RBP10.69□□□□□ -0.7
CHFR-216ENST00000538235 KCTD7Q96MP8 289 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 HDHD3Q9BSH5 251 aaPredicted RBP10.69□□□□□ -0.7
CHFR-216ENST00000538235 TMEM59Q9BXS4 323 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 LIN7BQ9HAP6 207 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 ESM1Q9NQ30 184 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 ZNRD1Q9P1U0 126 aa10.69□□□□□ -0.7
CHFR-216ENST00000538235 FAM172BPA6NC97 362 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 NOTOA8MTQ0 251 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 M0R1W7 72 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 ZNF780AO75290 641 aaPredicted RBP10.68□□□□□ -0.7
CHFR-216ENST00000538235 UBBP0CG47 229 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 ARSBP15848 533 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 OMGP23515 440 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 SSTR5P35346 364 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 RPS19P39019 145 aaKnown RBP10.68□□□□□ -0.7
CHFR-216ENST00000538235 PAX5Q02548 391 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 CNPY1Q3B7I2 92 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 KRBOX4Q5JUW0 171 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 ATAD3CQ5T2N8 411 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 RAB12Q6IQ22 244 aa10.68□□□□□ -0.7
CHFR-216ENST00000538235 OR2W3Q7Z3T1 314 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms