RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 DYRK2Q92630 601 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 C5orf30Q96GV9 206 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 C18orf12Q96KH6 178 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SIGLEC12Q96PQ1 595 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ACCSQ96QU6 501 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TBX15Q96SF7 602 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 FEVQ99581 238 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ARHGDIGQ99819 225 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TBL1YQ9BQ87 522 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SLC25A21Q9BQT8 299 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 MRPL45Q9BRJ2 306 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 GINS3Q9BRX5 216 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PSMG3Q9BT73 122 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 VAMP8Q9BV40 100 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 RAB11FIP5Q9BXF6 653 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SLC17A9Q9BYT1 436 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 P2RY12Q9H244 342 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TCEAL2Q9H3H9 227 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 C1orf198Q9H425 327 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SRD5A3Q9H8P0 318 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 MOB1AQ9H8S9 216 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 WDR54Q9H977 334 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 ELL3Q9HB65 397 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 BEX1Q9HBH7 125 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CDH20Q9HBT6 801 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SGK2Q9HBY8 427 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 BPIFA1Q9NP55 256 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 OR2S2Q9NQN1 319 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 MRPL17Q9NRX2 175 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 TAS2R16Q9NYV7 291 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 AHSPQ9NZD4 102 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 MTCH1Q9NZJ7 389 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CLN8Q9UBY8 286 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 UQCR10Q9UDW1 63 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SLC23A2Q9UGH3 650 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 JPT1Q9UK76 154 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 KCNK6Q9Y257 313 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 AK6Q9Y3D8 172 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 WIPI2Q9Y4P8 454 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 HES2Q9Y543 173 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 DNAJC15Q9Y5T4 150 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 URGCP-MRPS24S4R325 110 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 CACNA1SQ13698 1873 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 A0A0G2JMZ2 1700 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 LRRC37A2A6NM11 1700 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 LRRC37AA6NMS7 1700 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 LOC100509620A0A075B734 347 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 hCG_38984A0A1B0GV85 526 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 TLCD2A6NGC4 264 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 A8MT66 165 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 ZNF705FA8MVS1 300 aaPredicted RBP2.1□□□□□ -2.07
SKA3-207ENST00000536239 HIDE1A8MVS5 230 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 C9JQL5 133 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 FTCDNL1E5RQL4 147 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 F5H5T6 163 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 F8WDY8 70 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 J3QR89 54 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 K7EQM0 130 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 PIRO00625 290 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 RFXANKO14593 260 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 XKRYO14609 159 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 AGPAT2O15120 278 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 SIVA1O15304 175 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 ADAM20O43506 726 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 TRAF3IP2O43734 574 aaPredicted RBP2.1□□□□□ -2.07
SKA3-207ENST00000536239 KLK8O60259 260 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 SCGB2A1O75556 95 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 ZNF682O95780 498 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 GPR75O95800 540 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 IGHG4P01861 327 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 OPN1SWP03999 348 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 GBAP04062 536 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 ATP1B1P05026 303 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 CXCL1P09341 107 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 OR4Q2P0C623 313 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 ZNF705DP0CH99 300 aaPredicted RBP2.1□□□□□ -2.07
SKA3-207ENST00000536239 ZNF705BP0CI00 300 aaPredicted RBP2.1□□□□□ -2.07
SKA3-207ENST00000536239 PGA4P0DJD7 388 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 PGA5P0DJD9 388 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 OR12D1P0DN82 309 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 UROSP10746 265 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 IRF1P10914 325 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 GOT1P17174 413 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 CD22P20273 847 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 RPS4Y1P22090 263 aaKnown RBP2.1□□□□□ -2.07
SKA3-207ENST00000536239 OMGP23515 440 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 ADORA1P30542 326 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 SRD5A2P31213 254 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 OTX2P32243 289 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 AQP2P41181 271 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 GPR6P46095 362 aaPredicted RBP2.1□□□□□ -2.07
SKA3-207ENST00000536239 HMGCS2P54868 508 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 CAV3P56539 151 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 RAB38P57729 211 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 OR12D2P58182 307 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 MTPNP58546 118 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 TAS2R41P59536 307 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 PLP1P60201 277 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 SRPXP78539 464 aa2.1□□□□□ -2.07
SKA3-207ENST00000536239 RUNX1Q01196 453 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms