RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 H1FXQ92522 213 aaKnown RBP12.9□□□□□ -0.34
CNN1-202ENST00000535659 SULT4A1Q9BR01 284 aa12.9□□□□□ -0.34
CNN1-202ENST00000535659 NUDT16L1Q9BRJ7 211 aaKnown RBP12.9□□□□□ -0.34
CNN1-202ENST00000535659 PECRQ9BY49 303 aa12.9□□□□□ -0.34
CNN1-202ENST00000535659 POLR3KQ9Y2Y1 108 aaPredicted RBP12.9□□□□□ -0.34
CNN1-202ENST00000535659 F8P00451 2351 aa12.9□□□□□ -0.35
CNN1-202ENST00000535659 FUOMA2VDF0 154 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 CDK2P24941 298 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 GZMKP49863 264 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 EDDM3BP56851 147 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 EDDM3AQ14507 147 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 ATXN7L3Q14CW9 347 aaPredicted RBP12.89□□□□□ -0.35
CNN1-202ENST00000535659 ARL6IP1Q15041 203 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 CNPY1Q3B7I2 92 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 CDNFQ49AH0 187 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 LINC01356Q8N9X3 169 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 OR4M1Q8NGD0 313 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 PLPPR1Q8TBJ4 325 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 DCTN5Q9BTE1 182 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 MIXL1Q9H2W2 232 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 LPAR2Q9HBW0 351 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 ING3Q9NXR8 418 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 ETAA1Q9NY74 926 aa12.89□□□□□ -0.35
CNN1-202ENST00000535659 TRAV18A0A075B6X5 111 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 FAM25AB3EWG3 89 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 FAM25CB3EWG5 89 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 FAM25GB3EWG6 89 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 XRCC3O43542 346 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 CA11O75493 328 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 IGHV4-31P0DP07 118 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 HIST1H1DP16402 221 aaKnown RBP12.88□□□□□ -0.35
CNN1-202ENST00000535659 GLIPR1P48060 266 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 P2RX3P56373 397 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 RPL31P62899 125 aaKnown RBP12.88□□□□□ -0.35
CNN1-202ENST00000535659 PAX5Q02548 391 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 MEF2CQ06413 473 aaPredicted RBP12.88□□□□□ -0.35
CNN1-202ENST00000535659 KRBOX4Q5JUW0 171 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 CYB5R2Q6BCY4 276 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 SLC35E4Q6ICL7 350 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 TPRX1Q8N7U7 411 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 DTX3Q8N9I9 347 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 MSI2Q96DH6 328 aaKnown RBP12.88□□□□□ -0.35
CNN1-202ENST00000535659 COQ2Q96H96 371 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 CYYR1Q96J86 154 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 COX4I2Q96KJ9 171 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 NCOR1P1Q9H4R4 102 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 RPUSD1Q9UJJ7 312 aaKnown RBP12.88□□□□□ -0.35
CNN1-202ENST00000535659 ADAM30Q9UKF2 790 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 KCNK7Q9Y2U2 307 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 MALRD1Q5VYJ5 2156 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 TRBV23-1A0A0A0MS06 115 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 MT-ND4P03905 459 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 MSMBP08118 114 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 GNB3P16520 340 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 ZNF260Q3ZCT1 412 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 RSBN1Q5VWQ0 802 aaPredicted RBP12.88□□□□□ -0.35
CNN1-202ENST00000535659 ZNF497Q6ZNH5 498 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 C18orf12Q96KH6 178 aa12.88□□□□□ -0.35
CNN1-202ENST00000535659 ZMAT3Q9HA38 289 aaKnown RBP12.88□□□□□ -0.35
CNN1-202ENST00000535659 CELSR1Q9NYQ6 3014 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 MED13LQ71F56 2210 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 PPIAL4CA0A0B4J2A2 164 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 KIR2DS1A0A191URI9 304 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 hADV38S2A0JD32 116 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 C22orf46C9J442 243 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 MFNGO00587 321 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 TGFAP01135 160 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 LIPFP07098 398 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 GSTP1P09211 210 aaKnown RBP12.87□□□□□ -0.35
CNN1-202ENST00000535659 TNFSF8P32971 234 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 PAX2Q02962 417 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 TMEM200BQ69YZ2 307 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 LAX1Q8IWV1 398 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 GAPTQ8N292 157 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 C8orf46Q8TAG6 207 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 DYRK2Q92630 601 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 DMRTB1Q96MA1 342 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.87□□□□□ -0.35
CNN1-202ENST00000535659 MMP26Q9NRE1 261 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 C19orf12Q9NSK7 152 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 AK3Q9UIJ7 227 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 KIF25Q9UIL4 384 aa12.87□□□□□ -0.35
CNN1-202ENST00000535659 MEIKINA0A087WXM9 373 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 TRAV20A0A0B4J274 112 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 TMEM30CPA0ZSE6 113 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 ODAMA1E959 279 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 SERPINE3A8MV23 424 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 PPIAL4GP0DN37 164 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 S100A5P33763 92 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 TMEM69Q5SWH9 247 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 OLFML2AQ68BL7 652 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 IZUMO1Q8IYV9 350 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 FAM185AQ8N0U4 392 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 ZNF565Q8N9K5 539 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 CORO2AQ92828 525 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 DIRAS2Q96HU8 199 aa12.86□□□□□ -0.35
CNN1-202ENST00000535659 CMSS1Q9BQ75 279 aaKnown RBP12.86□□□□□ -0.35
CNN1-202ENST00000535659 TMUB1Q9BVT8 246 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms