RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 GPR137BO60478 399 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 CD55P08174 381 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 NKX2-1P43699 371 aaPredicted RBP11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 LINC00205P59089 165 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 RAB11AP62491 216 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 DAZAP2Q15038 168 aaPredicted RBP11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 RNASE11Q8TAA1 199 aaKnown RBP11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 PFDN5Q99471 154 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 ZNF503-AS2A6NEH8 195 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 UBE2CO00762 179 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 TAAR5O14804 337 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 SYNGR1O43759 233 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 MLF1P58340 268 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 FAM3AP98173 230 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 SSX7Q7RTT5 188 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 CCDC54Q8NEL0 328 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 OR56B2PQ8NGI1 322 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 OR1F12Q8NHA8 337 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 BOD1Q96IK1 185 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 TGIF2Q9GZN2 237 aa11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 FGF23Q9GZV9 251 aaPredicted RBP11.97□□□□□ -0.49
LPCAT3-203ENST00000535479 IFNA4P05014 189 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 HEXAP06865 529 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 VAMP2P63027 116 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 EIF5AP63241 154 aaKnown RBP11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 ODF3L1Q8IXM7 274 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 RHBDD1Q8TEB9 315 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 EXTL1Q92935 676 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 SGCZQ96LD1 299 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 ZNF665Q9H7R5 613 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 DOK5Q9P104 306 aa11.96□□□□□ -0.49
LPCAT3-203ENST00000535479 CADP27708 2225 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 PINLYPA6NC86 204 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 RBFOX3A6NFN3 312 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 UMODP07911 640 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 MRPS34P82930 218 aaKnown RBP11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 MALLQ13021 153 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 HERPUD1Q15011 391 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 PCOLCEQ15113 449 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 SPINK14Q6IE38 97 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 AAED1Q7RTV5 226 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 LGI3Q8N145 548 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 TM2D1Q9BX74 207 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 UCK1Q9HA47 277 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 PPP1R3CQ9UQK1 317 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 POLEQ07864 2286 aa11.96□□□□□ -0.5
LPCAT3-203ENST00000535479 MPPED1O15442 326 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 METTL15P1P0C7V9 234 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 RNF224P0DH78 156 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 FABP4P15090 132 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 PRSS8Q16651 343 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 SPSB3Q6PJ21 355 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 ZNF429Q86V71 674 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 PP6455Q8WZ26 134 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 INTS12Q96CB8 462 aaKnown RBP11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 C18orf12Q96KH6 178 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 ZNF251Q9BRH9 671 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 ZNF286AQ9HBT8 521 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 TINAGQ9UJW2 476 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 HDGFL3Q9Y3E1 203 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 SVEP1Q4LDE5 3571 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 CNOT1A5YKK6 2376 aaKnown RBP11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 C5orf49A4QMS7 147 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 AP4M1O00189 453 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 SOD3P08294 240 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 CARD18P57730 90 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 RPL23AP62750 156 aaKnown RBP11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 TMEM252Q8N6L7 170 aa11.95□□□□□ -0.5
LPCAT3-203ENST00000535479 SYNGR3O43761 229 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 LIFP15018 202 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 TCN2P20062 427 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 H3F3AP84243 136 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 CPNE4Q96A23 557 aaPredicted RBP11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 S100PBPQ96BU1 408 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 WNT5BQ9H1J7 359 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 RNF150Q9ULK6 438 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 CEP192Q8TEP8 1941 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 ARFGEF3Q5TH69 2177 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 IGKV1-6A0A0C4DH72 117 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 K7N7A8 449 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 PPIHO43447 177 aaKnown RBP11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 GPR157Q5UAW9 335 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 ALKBH2Q6NS38 261 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 Q6ZRM9 215 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 SNX22Q96L94 193 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 GINS3Q9BRX5 216 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 PRRG4Q9BZD6 226 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 RNF122Q9H9V4 155 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 OR1A1Q9P1Q5 309 aa11.94□□□□□ -0.5
LPCAT3-203ENST00000535479 TP53I11O14683 189 aa11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 SRFP11831 508 aa11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 S100PP25815 95 aa11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 EIF2S3P41091 472 aaKnown RBP11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 SUMO3P55854 103 aaPredicted RBP11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 CLDN15P56746 228 aa11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 FIP1L1Q6UN15 594 aaKnown RBP11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 OR10D3Q8NH80 312 aa11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 FOXB1Q99853 325 aa11.93□□□□□ -0.5
LPCAT3-203ENST00000535479 TUBA4BQ9H853 241 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms