RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SETD2Q9BYW2 2564 aaPredicted RBP-0.51□□□□□ -2.49
COPB1-212ENST00000534771 REG4Q9BYZ8 158 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 ZNF436Q9C0F3 470 aaPredicted RBP-0.51□□□□□ -2.49
COPB1-212ENST00000534771 IL22Q9GZX6 179 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 PTTG3PQ9NZH4 202 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 ODF2LQ9ULJ1 636 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 ORC6Q9Y5N6 252 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 ZNF292O60281 2723 aa-0.51□□□□□ -2.49
COPB1-212ENST00000534771 CNTRLQ7Z7A1 2325 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 ADAMTSL1Q8N6G6 1762 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 PEAK1Q9H792 1746 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 POLR3AO14802 1390 aaPredicted RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 TRBV6-7A0A0A0MS04 114 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 SLC5A10A0PJK1 596 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 SMCO3A2RU48 225 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 TMEM235A6NFC5 223 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 H3BPC8 53 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 UBFD1O14562 309 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 TOR1AO14656 332 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 RNF113AO15541 343 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 COCHO43405 550 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 GMFGO60234 142 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 SNAI1O95863 264 aaPredicted RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 CTSEP14091 401 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 ACAA2P42765 397 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 MRPL19P49406 292 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 EVX1P49640 407 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 HCCSP53701 268 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 PLTPP55058 493 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 RPL23AP62750 156 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 TAF7Q15545 349 aaPredicted RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 CEACAM21Q3KPI0 293 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 CCDC184Q52MB2 194 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 CLEC12AQ5QGZ9 265 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 PRAMEF5Q5TYX0 476 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 PRAMEF6Q5VXH4 476 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 THOC7Q6I9Y2 204 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 LAIR2Q6ISS4 152 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 ERICH5Q6P6B1 374 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 CLEC19AQ6UXS0 136 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 NDUFAF7Q7L592 441 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 MARCH3Q86UD3 253 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 KIF2BQ8N4N8 673 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 KRTCAP2Q8N6L1 136 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 CCNYL1Q8N7R7 359 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 ASCC1Q8N9N2 400 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 OR56B2PQ8NGI1 322 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 OR6K3Q8NGY3 331 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 OR10A6Q8NH74 314 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 PDCD6IPQ8WUM4 868 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 KCTD4Q8WVF5 259 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 OBSCN-AS1Q96MR7 158 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 SCGB3A2Q96PL1 93 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 XPO6Q96QU8 1125 aaKnown RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 METTL26Q96S19 204 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 C20orf144Q9BQM9 153 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 ANAPC13Q9BS18 74 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 ERP44Q9BS26 406 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 TMED9Q9BVK6 235 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 MND1Q9BWT6 205 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 HIVEP3Q5T1R4 2406 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 NCOA6Q14686 2063 aaPredicted RBP-0.52□□□□□ -2.49
COPB1-212ENST00000534771 KMT2AQ03164 3969 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 TENM2Q9NT68 2774 aa-0.52□□□□□ -2.49
COPB1-212ENST00000534771 ZANQ9Y493 2812 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 EML5Q05BV3 1969 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 RNF213Q63HN8 5207 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 IGHV3OR15-7A0A075B7D8 119 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 A0A0D9SG42 100 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 TRBV11-1A0A0K0K1C0 115 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 TRAPPC13A5PLN9 417 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 ARGFXA6NJG6 315 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 OR2AT4A6NND4 320 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 UPK2O00526 184 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 DENRO43583 198 aaKnown RBP-0.53□□□□□ -2.49
COPB1-212ENST00000534771 MTX2O75431 263 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 CIAO1O76071 339 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 LY6HO94772 140 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 TDP2O95551 362 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 PTTG1O95997 202 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 TAC1P20366 129 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 ARL2P36404 184 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 NBL1P41271 181 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 REG1BP48304 166 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 TAS2R39P59534 338 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 ELOBQ15370 118 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 MAJINQ3KP22 176 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 HSP90B2PQ58FF3 399 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 C10orf55Q5SWW7 151 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 TEX36Q5VZQ5 186 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 SLC25A24Q6NUK1 477 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 TPGS1Q6ZTW0 290 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 C7orf65Q6ZTY9 151 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 SLC35E3Q7Z769 313 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 VTCN1Q7Z7D3 282 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 LHFPL1Q86WI0 220 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 NBPF5PQ86XG9 351 aaPredicted RBP-0.53□□□□□ -2.49
COPB1-212ENST00000534771 TRIML2Q8N7C3 387 aa-0.53□□□□□ -2.49
COPB1-212ENST00000534771 OR11H1Q8NG94 326 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms