RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 MELTFP08582 738 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ADRA2AP08913 450 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 H2BFMP0C1H6 154 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SLC35E2BP0CK96 405 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 DNAH10OSP0CZ25 163 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 MPC1LP0DKB6 136 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ABOP16442 354 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ADCYAP1P18509 176 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CXCL3P19876 107 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 PGCP20142 388 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 IGFBP5P24593 272 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 STOMP27105 288 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 PSMB5P28074 263 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 FGF9P31371 208 aaPredicted RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 RPL13AP40429 203 aaKnown RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 CRATP43155 626 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 BDKRB1P46663 353 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 DAPP51397 102 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 RORCP51449 518 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 EFNB2P52799 333 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 UCNP55089 124 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CDKN2DP55273 166 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR4D2P58180 307 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 RPS4XP62701 263 aaKnown RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 RBX1P62877 108 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 PPP3R1P63098 170 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ERVK-25P63136 954 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SKP1P63208 163 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 BDH1Q02338 343 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CHRNB3Q05901 458 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 C2orf80Q0P641 193 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ZP4Q12836 540 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ATXN7L3Q14CW9 347 aaPredicted RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 KIAA0040Q15053 153 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 C3AR1Q16581 482 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SLC5A12Q1EHB4 618 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 GSG1Q2KHT4 349 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CHRFAM7AQ494W8 412 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 BEX5Q5H9J7 111 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 PYY3Q5JQD4 70 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 FAM74A1Q5RGS3 127 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 MUC21Q5SSG8 566 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 DCAF12Q5T6F0 453 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 LIPNQ5VXI9 398 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ZNF660Q6AZW8 331 aaPredicted RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 LEG1Q6P5S2 330 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 DEGS2Q6QHC5 323 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SPESP1Q6UW49 350 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ZNF730Q6ZMV8 503 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 MBOAT1Q6ZNC8 495 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 TMEM91Q6ZNR0 172 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OOSP2Q86WS3 158 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 MFSD9Q8NBP5 474 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR7G2Q8NG99 324 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR10A7Q8NGE5 316 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR8J3Q8NGG0 315 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR51G2Q8NGK0 314 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR9I1Q8NGQ6 314 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR13C9Q8NGT0 318 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR2A1Q8NGT9 310 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR6K3Q8NGY3 331 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR2L8Q8NGY9 312 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR1F12Q8NHA8 337 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 RNASE11Q8TAA1 199 aaKnown RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 ZNF675Q8TD23 568 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 HAVCR2Q8TDQ0 301 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CD300LFQ8TDQ1 290 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 RXFP4Q8TDU9 374 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CT55Q8WUE5 264 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 LCN9Q8WX39 176 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ASB13Q8WXK3 278 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 LHX4Q969G2 390 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CERS2Q96G23 380 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SDSLQ96GA7 329 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 FAM210BQ96KR6 192 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 FCRL1Q96LA6 429 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ERMAPQ96PL5 475 aaPredicted RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 ALKBH3Q96Q83 286 aaPredicted RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 GPR21Q99679 349 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 C7orf50Q9BRJ6 194 aaKnown RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 COPS4Q9BT78 406 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ST6GALNAC5Q9BVH7 336 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 GGACTQ9BVM4 153 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CHST5Q9GZS9 411 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OPN3Q9H1Y3 402 aaPredicted RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 MED28Q9H204 178 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 RHBGQ9H310 441 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR51J1Q9H342 316 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SRMSQ9H3Y6 488 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SPACA1Q9HBV2 294 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ISYNA1Q9NPH2 558 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 STARD5Q9NSY2 213 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 DCAF13Q9NV06 445 aaKnown RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 HRASLS2Q9NWW9 162 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 NDUFB11Q9NX14 153 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CLEC5AQ9NY25 188 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 VNN3Q9NY84 501 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ZNF107Q9UII5 783 aaPredicted RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 ASF1AQ9Y294 204 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 RNF115Q9Y4L5 304 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms