RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CHST4Q8NCG5 386 aa11.47□□□□□ -0.57
VPS11-205ENST00000534551 OR5D13Q8NGL4 314 aa11.47□□□□□ -0.57
VPS11-205ENST00000534551 PPP1R35Q8TAP8 253 aa11.47□□□□□ -0.57
VPS11-205ENST00000534551 ZNF714Q96N38 554 aa11.47□□□□□ -0.57
VPS11-205ENST00000534551 DPCDQ9BVM2 203 aaPredicted RBP11.47□□□□□ -0.57
VPS11-205ENST00000534551 MS4A7Q9GZW8 240 aaPredicted RBP11.47□□□□□ -0.57
VPS11-205ENST00000534551 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
VPS11-205ENST00000534551 KIF25Q9UIL4 384 aa11.47□□□□□ -0.57
VPS11-205ENST00000534551 A0A0U1RQK1 487 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 ODAMA1E959 279 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 TMEM14DPA8MWL7 114 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 ZNF780AO75290 641 aaPredicted RBP11.46□□□□□ -0.57
VPS11-205ENST00000534551 VENTXO95231 258 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 CSN2P05814 226 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 CLEC2LP0C7M8 214 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 ZNF728P0DKX0 622 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 SLC2A2P11168 524 aaPredicted RBP11.46□□□□□ -0.57
VPS11-205ENST00000534551 OMGP23515 440 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 DEFB112Q30KQ8 113 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 UTF1Q5T230 341 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 TEX29Q8N6K0 151 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 OR51D1Q8NGF3 324 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 OR13A1Q8NGR1 328 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 NEK7Q8TDX7 302 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 C17orf50Q8WW18 174 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 FOXRED1Q96CU9 486 aaPredicted RBP11.46□□□□□ -0.57
VPS11-205ENST00000534551 YIPF6Q96EC8 236 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 METTL8Q9H825 291 aaKnown RBP11.46□□□□□ -0.57
VPS11-205ENST00000534551 RCC2Q9P258 522 aaKnown RBP11.46□□□□□ -0.57
VPS11-205ENST00000534551 SSR3Q9UNL2 185 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 LINC00312Q9Y6C7 94 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 V9GY05 133 aa11.46□□□□□ -0.57
VPS11-205ENST00000534551 TRAV1-2A0A0B4J238 106 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 TMEM272A0A1B0GTI8 110 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 hADV38S2A0JD32 116 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 C17orf98A8MV24 154 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 CLPXO76031 633 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 BPNT1O95861 308 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 RAB3BP20337 219 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 GALP22466 123 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 PRTN3P24158 256 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 ERP29P30040 261 aaKnown RBP11.45□□□□□ -0.58
VPS11-205ENST00000534551 FGF9P31371 208 aaPredicted RBP11.45□□□□□ -0.58
VPS11-205ENST00000534551 LSM3P62310 102 aaKnown RBP11.45□□□□□ -0.58
VPS11-205ENST00000534551 MXD1Q05195 221 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 BLMHQ13867 455 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 GPR176Q14439 515 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 TUSC1Q2TAM9 212 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 NKAPLQ5M9Q1 402 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 RAB12Q6IQ22 244 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 LINC00596Q86U02 117 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 UBALD1Q8TB05 177 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 MRGPRDQ8TDS7 321 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 TMEM59Q9BXS4 323 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 CST11Q9H112 138 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 IFT22Q9H7X7 185 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 VCX3AQ9NNX9 186 aa11.45□□□□□ -0.58
VPS11-205ENST00000534551 MEIKINA0A087WXM9 373 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 TCF21O43680 179 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 UBBP0CG47 229 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 IGHV1-8P0DP01 117 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 JUNBP17275 347 aaPredicted RBP11.44□□□□□ -0.58
VPS11-205ENST00000534551 SDC2P34741 201 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 SSTR5P35346 364 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 RPS27AP62979 156 aaKnown RBP11.44□□□□□ -0.58
VPS11-205ENST00000534551 MEF2CQ06413 473 aaPredicted RBP11.44□□□□□ -0.58
VPS11-205ENST00000534551 KRTAP24-1Q3LI83 254 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 FAM3DQ96BQ1 224 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 LPAR5Q9H1C0 372 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 GHRLQ9UBU3 117 aa11.44□□□□□ -0.58
VPS11-205ENST00000534551 TRGV10A0A0A0MS01 117 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 UBE2QL1A1L167 161 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 PDCD5O14737 125 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 NPFFO15130 113 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 LDLRAD4O15165 306 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 IFNA2P01563 188 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 ARSBP15848 533 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 CHATP28329 748 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 SAA4P35542 130 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 EFNB2P52799 333 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 LTC4SQ16873 150 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 C17orf58Q2M2W7 97 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 LDLRAD2Q5SZI1 272 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 NCR3LG1Q68D85 454 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 FAM53AQ6NSI3 398 aaPredicted RBP11.43□□□□□ -0.58
VPS11-205ENST00000534551 C9orf139Q6ZV77 190 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 C5orf24Q7Z6I8 188 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 ZDHHC22Q8N966 263 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 CCDC107Q8WV48 283 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 TAF15Q92804 592 aaKnown RBP eCLIP11.43□□□□□ -0.58
VPS11-205ENST00000534551 MRPS24Q96EL2 167 aaKnown RBP11.43□□□□□ -0.58
VPS11-205ENST00000534551 DMRTB1Q96MA1 342 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 KCTD7Q96MP8 289 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 SULT4A1Q9BR01 284 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 TM2D1Q9BX74 207 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 SUCNR1Q9BXA5 334 aa11.43□□□□□ -0.58
VPS11-205ENST00000534551 UNKLQ9H9P5 680 aaKnown RBP11.43□□□□□ -0.58
VPS11-205ENST00000534551 LIN7BQ9HAP6 207 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms