RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 RPUSD3Q6P087 351 aaKnown RBP10.75□□□□□ -0.69
BDNF-218ENST00000533246 WDR74Q6RFH5 385 aaPredicted RBP10.75□□□□□ -0.69
BDNF-218ENST00000533246 SPSB1Q96BD6 273 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 REG4Q9BYZ8 158 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 RASL12Q9NYN1 266 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 NYNRINQ9P2P1 1898 aaKnown RBP10.75□□□□□ -0.69
BDNF-218ENST00000533246 USF3Q68DE3 2245 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 ANKRD36A6QL64 1941 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 E5RGE8 158 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 SH2D1BO14796 132 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 GEMIN2O14893 280 aaKnown RBP10.75□□□□□ -0.69
BDNF-218ENST00000533246 IL2RAP01589 272 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 TTRP02766 147 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 OR5AC1P0C628 307 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 LINC00614P0C842 121 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 MLF1P58340 268 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 DMWDQ09019 674 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 PMS2P11Q13670 270 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 RPL7L1Q6DKI1 246 aaKnown RBP10.75□□□□□ -0.69
BDNF-218ENST00000533246 TUSC5Q8IXB3 177 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 NECAP1Q8NC96 275 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 ADAD2Q8NCV1 583 aaKnown RBP10.75□□□□□ -0.69
BDNF-218ENST00000533246 OR5AP2Q8NGF4 316 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 SLC25A38Q96DW6 304 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 PRRX2Q99811 253 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 FAM173AQ9BQD7 235 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 B3GAT1Q9P2W7 334 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 POLDIP2Q9Y2S7 368 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 NSG2Q9Y328 171 aa10.75□□□□□ -0.69
BDNF-218ENST00000533246 A0A0J9YW62 118 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 A0A1W2PPE3 182 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 ARR3P36575 388 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 MMP16P51512 607 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 DEFB124Q8NES8 71 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 OR10V1Q8NGI7 309 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 RNF133Q8WVZ7 376 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 APOBEC3DQ96AK3 386 aaPredicted RBP10.74□□□□□ -0.69
BDNF-218ENST00000533246 RPUSD4Q96CM3 377 aaKnown RBP10.74□□□□□ -0.69
BDNF-218ENST00000533246 ZNF552Q9H707 407 aaPredicted RBP10.74□□□□□ -0.69
BDNF-218ENST00000533246 NOTCH2Q04721 2471 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 ELOA3CA0A087WX78 387 aaPredicted RBP10.74□□□□□ -0.69
BDNF-218ENST00000533246 A0A1W2PQD3 144 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 UPK3AO75631 287 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 ECI1P42126 302 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 SULT1A1P50225 295 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 RAB35Q15286 201 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 CEBPEQ15744 281 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 C1orf87Q8N0U7 546 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 LHX4Q969G2 390 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 NPIPB9F8W1W9 429 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 M0R1B8 84 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 MT-CO2P00403 227 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 CD200P41217 278 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 MAGEA5P43359 124 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 MICBQ29980 383 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 ISXQ2M1V0 245 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 CLEC18BQ6UXF7 455 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 WFDC8Q8IUA0 241 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 OR2M3Q8NG83 312 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 SVIPQ8NHG7 77 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 CT55Q8WUE5 264 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 RAB33BQ9H082 229 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 SLC17A5Q9NRA2 495 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 MMP26Q9NRE1 261 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 PHF3Q92576 2039 aaKnown RBP10.74□□□□□ -0.69
BDNF-218ENST00000533246 FAM24AA6NFZ4 105 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 HMSDA8MTL9 139 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 VSIG10L2P0DP72 767 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 LTBRP36941 435 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 H3F3AP84243 136 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 PRDX4Q13162 271 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 ALKBH7Q9BT30 221 aaPredicted RBP10.74□□□□□ -0.69
BDNF-218ENST00000533246 GPR87Q9BY21 358 aa10.74□□□□□ -0.69
BDNF-218ENST00000533246 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
BDNF-218ENST00000533246 RCL1Q9Y2P8 373 aaKnown RBP10.74□□□□□ -0.69
BDNF-218ENST00000533246 DOCK4Q8N1I0 1966 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 TSPAN2O60636 221 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 DXOO77932 396 aaKnown RBP10.73□□□□□ -0.69
BDNF-218ENST00000533246 DUS4LO95620 317 aaKnown RBP10.73□□□□□ -0.69
BDNF-218ENST00000533246 HBE1P02100 147 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 SSBP1Q04837 148 aaKnown RBP10.73□□□□□ -0.69
BDNF-218ENST00000533246 EGR4Q05215 589 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 PIGYQ3MUY2 71 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 ARTNQ5T4W7 220 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 UBL7Q96S82 380 aaPredicted RBP10.73□□□□□ -0.69
BDNF-218ENST00000533246 WDR81Q562E7 1941 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 SPRY3O43610 288 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 TOX4O94842 621 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 SRD5A2P31213 254 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 NOVA1P51513 510 aaKnown RBP10.73□□□□□ -0.69
BDNF-218ENST00000533246 HERPUD1Q15011 391 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 UBE2V2Q15819 145 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 PNLIPRP3Q17RR3 467 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 LINC01590Q5TEZ4 76 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 SLC24A4Q8NFF2 622 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 APOBEC4Q8WW27 367 aaKnown RBP10.73□□□□□ -0.69
BDNF-218ENST00000533246 KISS1RQ969F8 398 aaPredicted RBP10.73□□□□□ -0.69
BDNF-218ENST00000533246 SARAFQ96BY9 339 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 PHYHIPLQ96FC7 376 aa10.73□□□□□ -0.69
BDNF-218ENST00000533246 RGPD3A6NKT7 1758 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms