RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 BLMHQ13867 455 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 ATXN7L3Q14CW9 347 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-214ENST00000533209 RAB11BQ15907 218 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 GPR157Q5UAW9 335 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 SIGIRRQ6IA17 410 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 BRD3OSQ6XYD6 125 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 BCL6BQ8N143 479 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-214ENST00000533209 KCNG3Q8TAE7 436 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 PLPPR1Q8TBJ4 325 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 YIPF6Q96EC8 236 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 SLC6A7Q99884 636 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 CHCHD6Q9BRQ6 235 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 DPCDQ9BVM2 203 aaPredicted RBP9.82□□□□□ -0.84
SSBP3-214ENST00000533209 CST11Q9H112 138 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 RNF167Q9H6Y7 350 aa9.82□□□□□ -0.84
SSBP3-214ENST00000533209 RCC2Q9P258 522 aaKnown RBP9.82□□□□□ -0.84
SSBP3-214ENST00000533209 IGHV1-69DA0A0B4J2H0 117 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 ODAMA1E959 279 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 FUOMA2VDF0 154 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 IGHV1-69P01742 117 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 FPR2P25090 351 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 CFPP27918 469 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 CLDN12P56749 244 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 BPIFB3P59826 476 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 PAX5Q02548 391 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 KRBOX4Q5JUW0 171 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 ATAD3CQ5T2N8 411 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 HES5Q5TA89 166 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 RSBN1Q5VWQ0 802 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-214ENST00000533209 RUSC1-AS1Q66K80 236 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 HCP5Q6MZN7 132 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 BRICD5Q6PL45 260 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 PDZD9Q8IXQ8 264 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 OR51D1Q8NGF3 324 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 CORO2AQ92828 525 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 FAM3DQ96BQ1 224 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 CYYR1Q96J86 154 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 KCTD7Q96MP8 289 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 ZNF714Q96N38 554 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 CENPOQ9BU64 300 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 TMEM59Q9BXS4 323 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 MS4A7Q9GZW8 240 aaPredicted RBP9.81□□□□□ -0.84
SSBP3-214ENST00000533209 NCOR1P1Q9H4R4 102 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 OCEL1Q9H607 264 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 ING3Q9NXR8 418 aa9.81□□□□□ -0.84
SSBP3-214ENST00000533209 TRGV10A0A0A0MS01 117 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 LOC100506127A0A0U1RQW1 187 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 SMIM30A4D0T7 59 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 IFITM5A6NNB3 132 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 LDLRAD4O15165 306 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 RBP4P02753 201 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 ARSBP15848 533 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 FUT3P21217 361 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 C2orf76Q3KRA6 126 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 NCR3LG1Q68D85 454 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 GDPGP1Q6ZNW5 385 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 OR2W3Q7Z3T1 314 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 TPRA1Q86W33 373 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 ZNF48Q96MX3 618 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-214ENST00000533209 TM2D1Q9BX74 207 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 BARHL1Q9BZE3 327 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 SPACA1Q9HBV2 294 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 FBLN5Q9UBX5 448 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 STEAP1Q9UHE8 339 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 KIF25Q9UIL4 384 aa9.8□□□□□ -0.84
SSBP3-214ENST00000533209 UBE2J1Q9Y385 318 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-214ENST00000533209 CUBNO60494 3623 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 FBN1P35555 2871 aaKnown RBP9.79□□□□□ -0.84
SSBP3-214ENST00000533209 A0A0A6YYD4 124 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 TMEM272A0A1B0GTI8 110 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 hCG_1809904A0A1W2PP81 198 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 A0A1W2PPE2 198 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 A0A1W2PR64 198 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 A0A1W2PRD5 423 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 A0A1W2PRF3 423 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 A0A1W2PRM7 423 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 A0A1W2PRV1 198 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 NOTOA8MTQ0 251 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 AIPO00170 330 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 PDCD6O75340 191 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 MMP23AO75900 390 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 GLAP06280 429 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 CLEC2LP0C7M8 214 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 CGB3P0DN86 165 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 CGB7P0DN87 165 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 IGHV1-8P0DP01 117 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 CHATP28329 748 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 SDC2P34741 201 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 UBE2E1P51965 193 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 GUCA2AQ02747 115 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 PLA2G7Q13093 441 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 TIMM50Q3ZCQ8 353 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 SLC35E4Q6ICL7 350 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 RAB12Q6IQ22 244 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 ZNF782Q6ZMW2 699 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-214ENST00000533209 ZNF497Q6ZNH5 498 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 USP43Q70EL4 1123 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 TRAPPC6BQ86SZ2 158 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 PNKDQ8N490 385 aa9.79□□□□□ -0.84
SSBP3-214ENST00000533209 PIP4P2Q8N4L2 257 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms