RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 IGLV3-12A0A075B6K2 115 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 LOC102723971A0A1B0GUV8 181 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 PROB1E7EW31 1015 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 PHOX2AO14813 284 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 MPPED1O15442 326 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 ANGPTL7O43827 346 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 OMGP23515 440 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 CHAF1BQ13112 559 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 ENDOGQ14249 297 aaKnown RBP12.78□□□□□ -0.36
CAPN1-224ENST00000533129 ZNF124Q15973 351 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 LPAL2Q16609 132 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 THAP3Q8WTV1 239 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-224ENST00000533129 ZNF581Q9P0T4 197 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 FER1L5A0AVI2 2057 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 LAMA1P25391 3075 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 TRAV1-1A0A0B4J248 108 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 SMCO3A2RU48 225 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 AQP7P3A6NL99 342 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 TERTO14746 1132 aaKnown RBP12.78□□□□□ -0.36
CAPN1-224ENST00000533129 SSSCA1O60232 199 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 ONECUT2O95948 504 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 OPN1LWP04000 364 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 ZNF883P0CG24 379 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 MMP9P14780 707 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 MPLP40238 635 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 VAMP2P63027 116 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 HIST1H3AP68431 136 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 TRA2AQ13595 282 aaKnown RBP eCLIP12.78□□□□□ -0.36
CAPN1-224ENST00000533129 OR8B8Q15620 311 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 RSPO1Q2MKA7 263 aaPredicted RBP12.78□□□□□ -0.36
CAPN1-224ENST00000533129 ASCL4Q6XD76 172 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 LOXL4Q96JB6 756 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 TMEM56Q96MV1 263 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 PRO1933Q9H354 126 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 PITPNC1Q9UKF7 332 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 TMEM56-RWDD3S4R434 201 aa12.78□□□□□ -0.36
CAPN1-224ENST00000533129 CLDN34H7C241 214 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 M0R135 149 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 NTN3O00634 580 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-224ENST00000533129 AADACP22760 399 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 CD200P41217 278 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 DYNLT3P51808 116 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 C10orf128Q5T292 105 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 FOXL2NBQ6ZUU3 175 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 DMRTC2Q8IXT2 367 aaPredicted RBP12.77□□□□□ -0.36
CAPN1-224ENST00000533129 CMTM1Q8IZ96 169 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 ZNF799Q96GE5 643 aa12.77□□□□□ -0.36
CAPN1-224ENST00000533129 RALGAPA1Q6GYQ0 2036 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 SPRY1O43609 319 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-224ENST00000533129 CYB5R3P00387 301 aaPredicted RBP12.77□□□□□ -0.37
CAPN1-224ENST00000533129 NDUFB7P17568 137 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 IL2RGP31785 369 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 CEACAM6P40199 344 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 NOVA1P51513 510 aaKnown RBP12.77□□□□□ -0.37
CAPN1-224ENST00000533129 EXT1Q16394 746 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 NKAIN1Q4KMZ8 207 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 CPEB2Q7Z5Q1 589 aaKnown RBP12.77□□□□□ -0.37
CAPN1-224ENST00000533129 SUMF1Q8NBK3 374 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 DYRK2Q92630 601 aa12.77□□□□□ -0.37
CAPN1-224ENST00000533129 A0A1B0GU03 582 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 C9J4A7 227 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 GEMIN2O14893 280 aaKnown RBP12.76□□□□□ -0.37
CAPN1-224ENST00000533129 TIAF1O95411 115 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 CNN3Q15417 329 aaKnown RBP12.76□□□□□ -0.37
CAPN1-224ENST00000533129 SSX2Q16385 188 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 FAM90A2PQ658T7 463 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 SHISA6Q6ZSJ9 500 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 ODF3L1Q8IXM7 274 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 NFAM1Q8NET5 270 aaPredicted RBP12.76□□□□□ -0.37
CAPN1-224ENST00000533129 CLEC18AA5D8T8 446 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 DVL1O14640 695 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 PPYP01298 95 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 EPHA1P21709 976 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 CLDN17P56750 224 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 ZNF695Q8IW36 515 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 C20orf196Q8IYI0 205 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 CLEC18CQ8NCF0 446 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 RNASEH2CQ8TDP1 164 aaKnown RBP12.76□□□□□ -0.37
CAPN1-224ENST00000533129 NABP1Q96AH0 204 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 SSX3Q99909 188 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 ARRDC1-AS1Q9H2J1 176 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 CALHM2Q9HA72 323 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 DKKL1Q9UK85 242 aa12.76□□□□□ -0.37
CAPN1-224ENST00000533129 IGKV1-27A0A075B6S5 117 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 DUXBA0A1W2PPF3 345 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 FGF5P12034 268 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 PTGDSP41222 190 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 TAS2R30P59541 319 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 H3F3AP84243 136 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 RUNX1Q01196 453 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 JOSD1Q15040 202 aaPredicted RBP12.75□□□□□ -0.37
CAPN1-224ENST00000533129 SPTSSAQ969W0 71 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 ATP5SQ99766 215 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 SMOC1Q9H4F8 434 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 TP53TG5Q9Y2B4 290 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 FAM221AA4D161 298 aa12.75□□□□□ -0.37
CAPN1-224ENST00000533129 CST7O76096 145 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms