RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CCDC90BQ9GZT6 254 aa14.33□□□□□ -0.12
SMG1-203ENST00000532700 TMEM133Q9H2Q1 129 aa14.33□□□□□ -0.12
SMG1-203ENST00000532700 TBL2Q9Y4P3 447 aaKnown RBP14.33□□□□□ -0.12
SMG1-203ENST00000532700 MAGEA13PA6NCF6 341 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 M0QZ24 198 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 HSPB6O14558 160 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 TMEM225BP0DP42 221 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 ZNF44P15621 663 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 CELP19835 753 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 RAB3AP20336 220 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 CD24P25063 80 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 ERP29P30040 261 aaKnown RBP14.32□□□□□ -0.12
SMG1-203ENST00000532700 IRF3Q14653 427 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 C17orf58Q2M2W7 97 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 TMEM95Q3KNT9 176 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 TRAPPC6BQ86SZ2 158 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 SAXO1Q8IYX7 474 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 LYG1Q8N1E2 194 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 OR4C13Q8NGP0 309 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 FAM110DQ8TAY7 271 aaPredicted RBP14.32□□□□□ -0.12
SMG1-203ENST00000532700 SGCDQ92629 289 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 CPNE2Q96FN4 548 aaPredicted RBP14.32□□□□□ -0.12
SMG1-203ENST00000532700 MMP27Q9H306 513 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 ZNF286AQ9HBT8 521 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 SERTAD4Q9NUC0 356 aa14.32□□□□□ -0.12
SMG1-203ENST00000532700 TRAV24A0A0B4J272 114 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 SH2D1BO14796 132 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 TIMM23O14925 209 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 MAGEB3O15480 346 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 CDK2P24941 298 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 OR3A4PP47883 348 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 MED22Q15528 200 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 PIGYQ3MUY2 71 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 Q499Y3 187 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 C1QL4Q86Z23 238 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 PLPPR1Q8TBJ4 325 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 CFHR4Q92496 578 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 THRSPQ92748 146 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 TMEM106AQ96A25 262 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 MALSU1Q96EH3 234 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 PGLYRP3Q96LB9 341 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 NR1H4Q96RI1 486 aaPredicted RBP14.31□□□□□ -0.12
SMG1-203ENST00000532700 CLEC7AQ9BXN2 247 aa14.31□□□□□ -0.12
SMG1-203ENST00000532700 YTHDF1Q9BYJ9 559 aaKnown RBP14.31□□□□□ -0.12
SMG1-203ENST00000532700 TRBV5-5A0A0J9YX44 114 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 PNMA8CA0A1B0GUJ8 204 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 ODAMA1E959 279 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 MRPS14O60783 128 aaKnown RBP14.3□□□□□ -0.12
SMG1-203ENST00000532700 GABARAPL2P60520 117 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 BLCAPP62952 87 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 PPP3R1P63098 170 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 CORO2AQ92828 525 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 FOXRED1Q96CU9 486 aaPredicted RBP14.3□□□□□ -0.12
SMG1-203ENST00000532700 OR5M11Q96RB7 305 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 RANBP3Q9H6Z4 567 aaPredicted RBP14.3□□□□□ -0.12
SMG1-203ENST00000532700 CKLFQ9UBR5 152 aa14.3□□□□□ -0.12
SMG1-203ENST00000532700 LSM2Q9Y333 95 aaKnown RBP14.3□□□□□ -0.12
SMG1-203ENST00000532700 UBE2J1Q9Y385 318 aaPredicted RBP14.3□□□□□ -0.12
SMG1-203ENST00000532700 TRAV39A0A0B4J263 110 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 CDRT1O95170 752 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 CGB3P0DN86 165 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 CGB7P0DN87 165 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 VSIG10L2P0DP72 767 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 RPS11P62280 158 aaKnown RBP eCLIP14.29□□□□□ -0.12
SMG1-203ENST00000532700 GPR50Q13585 617 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 HERPUD1Q15011 391 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 SATL1Q86VE3 508 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 Q8N2B8 174 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 MS4A15Q8N5U1 240 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 OR13A1Q8NGR1 328 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 NDNFQ8TB73 568 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 WIPF2Q8TF74 440 aaPredicted RBP14.29□□□□□ -0.12
SMG1-203ENST00000532700 TNFAIP8L1Q8WVP5 186 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 NPFFR1Q9GZQ6 430 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 ISYNA1Q9NPH2 558 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 NOTCH1P46531 2555 aa14.29□□□□□ -0.12
SMG1-203ENST00000532700 A0A1W2PP11 408 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 DEGS1O15121 323 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 IGLV1-47P01700 117 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 IGHV3-7P01780 117 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 CSN2P05814 226 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 MAPK3P27361 379 aaPredicted RBP14.28□□□□□ -0.12
SMG1-203ENST00000532700 DYNLT3P51808 116 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 KRBOX4Q5JUW0 171 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 ELP2Q6IA86 826 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 HEPN1Q6WQI6 88 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 ASCL4Q6XD76 172 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 ABHD12Q8N2K0 398 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 OR2T6Q8NHC8 308 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 UFD1Q92890 307 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 LEAP2Q969E1 77 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 TMEM138Q9NPI0 162 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 KIF25Q9UIL4 384 aa14.28□□□□□ -0.12
SMG1-203ENST00000532700 TRAV8-7A0A075B6U6 113 aa14.27□□□□□ -0.13
SMG1-203ENST00000532700 TRGV10A0A0A0MS01 117 aa14.27□□□□□ -0.13
SMG1-203ENST00000532700 SH2D7A6NKC9 451 aaPredicted RBP14.27□□□□□ -0.13
SMG1-203ENST00000532700 ADARB2-AS1A8MUL3 147 aa14.27□□□□□ -0.13
SMG1-203ENST00000532700 FAM90A22PA8MWA6 464 aa14.27□□□□□ -0.13
SMG1-203ENST00000532700 ALDOBP05062 364 aa14.27□□□□□ -0.13
SMG1-203ENST00000532700 HSMCR30P0CW71 290 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms